2hsdA_ref2 - reference 2


Name                 dihydropteridine desh				

Number of sequences              22
Alignment Length                 291
Longest Sequence                 262
Shortest Sequence                225
Average Percent Identity         28
Maximum Percent Identity         58
Minimum Percent Identity         11

Sequence Name    SWISSPROT Accession
2hsdA                P19992         
linc_psepa           P50197         
fabg_vibha           P55336         
3bhd_comte           P19871         
bend_acica           P07772         
xyll_psepu           P23102         
yxjf_bacsu           P42317         
dhgb_bacme           P07999         
linx_psepa           P50198         
ba72_eubsp           P19337         
y07e_myctu           Q11020         
fabg_arath           P33207         
hdha_ecoli           P25529         
kdud_bacsu           P50842         
phab_acisp           P50203         
nodg_azobr           P17611         
gno_gluox            P50199         
ke6_mouse            P50171         
dhk2_strvn           P16543         
1dhr                 P11348         
1fds                 P14061         
1eny                 P46533         

Family   2hsdA linc_psepa fabg_vibha 3bhd_comte bend_acica xyll_psepu yxjf_bacsu dhgb_bacme linx_psepa ba72_eubsp y07e_myctu fabg_arath hdha_ecoli kdud_bacsu phab_acisp nodg_azobr gno_gluox ke6_mouse dhk2_strvn
Family   1dhr
Family   1fds
Family   1eny


2hsdA        1  .ndlsgkTVIITGga..rGLGAEAArqavaa...GARVVLadvl.deega
linc_psepa   1  .sdlsgkTIIVTGgg..sGIGRATVellvas...GANVPVadin.deage
fabg_vibha   1  ..nlegkIALVTGas..rGIGRAIAellver...GATVIGtats..egga
3bhd_comte   1  .nrlqgkVALVTVva..sGVGLEVVklllge...GAKVAFsdin..aagq
bend_acica   1  ...fehkVVIVTGaa..qGIGRGVAlriaqe...GGCLILadrs..dliq
xyll_psepu   1  ...fqgkVAVITGaa..qGIGRRVAermaae...GGRLLLvdrs..elih
yxjf_bacsu   1  ...mrkqVALVTGaa..gGIRFEIArefare...GASVIVsdlr.peace
dhgb_bacme   1  .kdlegkVVVITGss..tGLGKSMAirfate...KAKVVVnyrskedean
linx_psepa   1  .nrlagkVALITGga..sGLGAAQAkrfaee...GAKVVIgdln.eemak
ba72_eubsp   1  .nlvqdkVTIITGgt..rGIGFAAAkifidn...GAKVSIfget.qeevd
y07e_myctu   1  .sllnarTAVITGga..qGLGLAIGqrfvae...GARVVLgdvn.leate
fabg_arath   1  .qkvespVVVITGas..rGIGKAIAlalgka...GCKVLVnyarsakeae
hdha_ecoli   1  ...ldgkCAIITGag..aGIGKEIAitfata...GASVVVsdin.adaan
kdud_bacsu   1  ...lkgkTALVTGpg..tGIGQGIAkalaga...GADIIGtsht..ssls
phab_acisp   1  ......kVALVTGal..gGIGSEICrqlvta...GYKIIAtvvp..reed
nodg_azobr   1  ...msqkIALVTGam..gGLG.TAIcqalak...DGCIVAancl..pnfe
gno_gluox    1  ...lsgaRALVTGas..rGIGLTLAkglary...GAEVVLngrn.aesld
ke6_mouse    1  ...lrsaLALVTGgag.sGIGRAISvrlaae...GAAVAAcdld.gaaaq
dhk2_strvn   1  ....eapVALVTGss..sGIGQTVAqrlaae...GYRVVVnsarsvedge
1dhr         1  ....earRVLVYGgr..gALGSRCVqafrar...NWWVASidvvene...
1fds         1  ....artVVLITGcs..sGIGLHLAvrlasdpsqSFKVYAtlrd.lktqg
1eny         1  aglldgkRILVSGiitdsSIAFHIArvaqeq...GAQLVLtgfdrlrliq

2hsdA       44  atarel..........gdaARYQHLDVtieedWQRVVAYAREef...gSV
linc_psepa  44  avvats..........ggkAAYFRCDIaqeedVKALVAQTLAaf...gGL
fabg_vibha  42  aaiseyl.........genGKGLALNVtdvesIEATLKTINDec...gAI
3bhd_comte  43  qlaael..........gerSMFVRHDVsseadWTLVMAAVQRrl...gTL
bend_acica  41  avlaeikal.......galAIAVETDLetyagAELVVSHAIAey...gRI
xyll_psepu  41  eladelvgv........aeVLTLTADLeqfaeCQRVMAAALErf...gRL
yxjf_bacsu  42  kaasklaee.......gfdAAAIPYDVtkeaqVADTVNVIQKqy...gRL
dhgb_bacme  45  svleeeikkv......ggeAIAVKGDVtvesdVINLVQSAIKef...gKL
linx_psepa  44  gvvaeiraa.......ggdALFIRLDVtdaasWNNAIAAAVDgf...gGL
ba72_eubsp  44  talaqlkely.....peeeVLGFAPDLtsrdaVMAAVGQVAQky...gRL
y07e_myctu  44  vaakrlgg........ddvALAVRCDVtqaddVDILIRTAVErf...gGL
fabg_arath  45  evakqieey.......ggqAITFGGDVskatdVDAMMKTALDkw...gTI
hdha_ecoli  42  hvvdeiqql.......ggqAFACRCDItseqeLSALADFAISkl...gKV
kdud_bacsu  41  etqqlveqe.......griFTSFTLDMskpeaIKDSAAELFEnr....QI
phab_acisp  38  rekqwlqsegf....qdsdVRFVLTDLnnheaATAAIQEAIAae...gRV
nodg_azobr  40  paaawlgqqea....lgfkFYVAEGDVsdfesCKAMVAKIEAdl...gPV
gno_gluox   42  saqsgfeae.......glkASTAVFDVtdqdaVIDGVAAIERdm...gPI
ke6_mouse   43  dtvrllgspgsedgaprgkHAAFQADVsqgpaARRLLEEVQAcfs..rPP
dhk2_strvn  42  ktaaal...........pdALYVRADVseeadARRLVDTAVEhy...gRL
1dhr        39  ..............easasVIVKMTD.sfteqADQVTAEVGKllgd.qKV
1fds        44  rlweaarala....cppgsLETLQLDVrdsksVAAARERVTE.....gRV
1eny        48  ritdrlpa..........kAPLLELDVqneehLASLAGRVTEaigagnKL

2hsdA       81  DGLVNNAGistgm.....fletesverf.rKVVEINLTGVFIGMKTVIPA
linc_psepa  81  DGSFNNAAipqag....lplaevslerf.rQSMDINVTGTFLCMKYQILA
fabg_vibha  80  DILVNNAGitrdn.....llmrmkddew.nDIINTNLTPIYRMSKAVLRG
3bhd_comte  80  NVLVNNAGillpg.....dmetgrledf.sRLLKINTESVFIGCQQGIAA
bend_acica  81  DVLINNVGgaiwm....kpfqefseeeiiqEVHRSLFPALW.CCRAVLPE
xyll_psepu  80  DILINNVGgtiwa....kpfehyqereieaEVRRSLFPTLW.CCHAALAP
yxjf_bacsu  82  DILVNNAGiqhva.....pieefptdtf.eQLIKVMLTAPFIAMKHVFPI
dhgb_bacme  86  DVMINNAGmenpv.....sshemslsdw.nKVIDTNLTGAFLGSREAIKY
linx_psepa  84  TTLSNTAGiihpg.....gfeeesiegw.nKMVAVNQTAIFLGIKAAIPE
ba72_eubsp  86  DVMINNAGitsnn.....vfsrvseeef.kHIMDINVTGVFNGAWCAYQC
y07e_myctu  83  DVMVNNAGitrda.....tmrtmteeqf.dQVIAVHLKGTWNGTRLAAAI
fabg_arath  85  DVVVNNAGitrdt.....llirmkqsqw.dEVIALNLTGVFLCTQAAVKI
hdha_ecoli  82  DILVNNAGgggpk.....pfd.mpmadf.rRAYELNVFSFFHLSQLVAPE
kdud_bacsu  80  DILVNNAGiihre.....kaedfpeenw.qHVLNVNLNSLFILTQLAGRH
phab_acisp  81  DVLVNNAGitrda.....tfkkmsyeqw.sQVIDTNLKTLFTVTQPVFNK
nodg_azobr  83  DILVNNAGitrdk.....ffakmdkaqw.dAVIATNLSSLFNVTQQVSPK
gno_gluox   82  DILINNAGiqrra.....pleefsrkdw.dDLMSTNVNAVFFVGQAVARH
ke6_mouse   91  SVVVSCAGitrde.....fllhmseedw.dRVIAVNLKGTFLVTQAAAQA
dhk2_strvn  78  DVLVNNAGrtraip..hadlaaatpevw.rEILGLNVIGTWQTTVAAMPH
1dhr        73  DAILCVAGgwagg.....nakskslfkncdLMWKQSIWTSTISSHLATKH
1fds        85  DVLVCNAGlgllg.....plealgedav.aSVLDVNVVGTVRMLQAFLPD
1eny        88  DGVVHSIGfmpqtgmginpffdapyadv.sKGIHISAYSYASMAKALLPI

2hsdA      125  Mkdag.gGSIVNISSAAGlm.glaltssyGASKWGVRGLSKLAAVEl...
linc_psepa 126  MiergtkGSIVNTASAAGvv.gvpmhgeyVGAKHAVVGLTRVAAADy...
fabg_vibha 124  Mmkkr.aGRIINVGSVVGtm.gnagqtnyAAAKAGVIGFTKSMAREv...
3bhd_comte 124  Mket..gGSIINMASVSSwl.pieqyagySASKAAVSALTRAAALScrkq
bend_acica 126  Mlkhq.qGTIVNVSSIATr...gihripySACKGGVNALTASLAFEh...
xyll_psepu 125  Mieqg.sGAIVNVSSVATr...gihrvpyGAAKGGVNALTACLAFEt...
yxjf_bacsu 126  Mkkqq.fGRIINIASVNGlv.gfagksayNSAKHGVIGLTKVGALEg...
dhgb_bacme 130  FvendikGTVINMSSVHEwkipwplfvhyAASKGGMKLMTETLALEy...
linx_psepa 128  Lvksg.nGSIINISSLIGmf.ptagnasyCATKAAVRIMSKAAALEf...
ba72_eubsp 130  Mkdak.kGVIINTASVTGif.gslsgvgyPASKASVIGLTHGLGREi...
y07e_myctu 127  Mrerk.rGAIVNMSSVSGkv.gmvgqtnySAAKAGIVGMTKAAAKEl...
fabg_arath 129  Mmkkk.rGRIINISSVVGli.gnigqanyTATKGGVISFSETPAREg...
hdha_ecoli 125  Mekng.gGVILTITSMAAen.kninmtsyASSKAAASHLVRNMAFDl...
kdud_bacsu 124  Mlkrg.hGKIINIASLLSfq.ggilvpayTASKHAVAGLTKSFANEw...
phab_acisp 125  Mleqk.sGRIVNISSVNGlk.gqfgqanySASKAGIIGFTKALAQEg...
nodg_azobr 127  Maerg.wGRIINISSVNGvk.gqagqtnySAAKAGVIGFTKALAAEl...
gno_gluox  126  Miprg.rGKIVNICSVQSel.arpgiapyTATKGAVKNLTKGMATDw...
ke6_mouse  135  LvssggrGSIINISSIIGkv.gnigqtnyASSKAGVIGLTQTAAREl...
dhk2_strvn 125  Larsg.nGSVVNVSSIAGsr.pagssipyAVSNGGHRAQTRLLANTv...
1dhr       118  Lke...gGLLTLAGAKAAld.gtpgmigyGMAKGAVHQLCQSLAGKnsg.
1fds       129  Mkrrg.sGRVLVTGSVGGlm.glpfndvyCASKFALEGLCESLAVLl...
1eny       137  Mnp...gGSIVGMDFDPSr..ampaynwmTVAKSALESVNRFVAREa...

2hsdA      170  gtdrIRVNSVHPGMTyt.PMTAETGi.............rqgegnyp..n
linc_psepa 172  gkhgIRVNALVPGAVrt.PMLQRAMdnd...........aglepyln.si
fabg_vibha 169  asrgVTVNTVAPGFIet.DMTKALN..............ddqraatl.sn
3bhd_comte 171  gyaiRRVNSIHPDGIyt.PMMQASLpkg.........vskemvlhdp.kl
bend_acica 169  aqhgIRVNAVATGGTkapPRKIPRNaqplskse..qvwmqqvvdqti.dr
xyll_psepu 168  aergIRVNATAPGGTea.RHGGFRNsaepseqe..kvwyqqivdqsl.ds
yxjf_bacsu 171  aphgITVNALCPGYVdt.QLVRNQLsdlsktrn...vpydsvleqvifpl
dhgb_bacme 177  apkgIRVNNIGPGAInt.PINAEKFad............peqradve.sm
linx_psepa 173  vdrgVRVNTIVPGGMnt.PITANVP..............pdvlkqqt.sq
ba72_eubsp 175  irknIRVVGVAPGVVnt.DMTNGNP..............peimegyl.ka
y07e_myctu 172  ahlgIRVNAIAPGLIrs.AMTEAMP..............qriwdqkl.ae
fabg_arath 174  asrnINVNVVCPGFIas.DMTAELG..............edmekkil.gt
hdha_ecoli 170  geknIRVNGIAPGAIlt.DALKSVIt.............peieqkml.qh
kdud_bacsu 169  aasgIQVNAIAPGYIst.ANTKPIRdd............ekrnedil.kr
phab_acisp 170  arsnICVNVVAPGYTat.PMVTAMR..............edviksie.aq
nodg_azobr 172  atkgVTVNAIAPGYIgt.DMVMAIR..............edirqait.ds
gno_gluox  171  grhgLQINGLAPGYFat.EMTERLVad............eeftdwlc.kr
ke6_mouse  181  grhgIRCNSVLPGFIat.PMTQKMP..............ekvkdkvt.am
dhk2_strvn 170  gpa.VRVNAVAPGLIet.PWTQNSDff............apiaehvr.qt
1dhr       163  mpsgAAAIAVLPVTLdt.PMNRKSMpe...............adfss...
1fds       174  lpfgVHLSLIECGPVhtaFMEKVLGspeevldrtdihtfhrfyqylahsk
1eny       179  gkygVRSNLVAAGPIrtlAMSAIVGgalg....eeagaqiqlleegwdqr

2hsdA      204  tpmg.rvgePGEIAGAVVKLl.sdtssyvTGAELAVDgg..
linc_psepa 209  hpig.rfsePHEQAQAAVWLl.sdaasfvTGSCLAADggft
fabg_vibha 203  vpag.rlgdPREIASAVVFLa.speaayiTGETLHVNgg..
3bhd_comte 210  nrag.raymPERIAQLVLFLa.sdessvmSGSELHAD....
bend_acica 216  sflg.rygsIDEQVNAITFLa.sdessyiTGSVLPVGgg..
xyll_psepu 214  slmk.rygsIDEQVEAILFLa.sdaasyiTGITLPVAgg..
yxjf_bacsu 217  vpqk.rllsVKEIADYAVFLa.sekakgvTGQAVVLDggyt
dhgb_bacme 213  ipmg.yigePEEIA.AVAWLa.sseasyvTGITLFADggmt
linx_psepa 207  ipmg.klgdPIDIANGALFLa.sdeakyiTGVDLPIDggws
ba72_eubsp 209  lpmk.rmlePEEIANVYLFLa.sdlasgiTATTVSVDgay.
y07e_myctu 206  vpmg.ragePSEVASVAVFLa.sdlssymTGTVLDVTgg..
fabg_arath 208  iplg.rygkAEEVAGLVEFLalspaasyiTGQAFTIDgg..
hdha_ecoli 205  tpir.rlgqPQDIANAALFLc.spaaswvSGQILTVSgg..
kdud_bacsu 205  ipag.rwgqADDIGGTAVFLa.srasdyvNGHILAVDggwl
phab_acisp 204  iplq.rlaaPAEIAAAVMYLv.sehgayvTGETLSINgg..
nodg_azobr 206  vpmk.rlgrPDEIGGAVSYLa.seiagyvTGSTLNINgg..
gno_gluox  207  tpag.rwgqVEELVGAAVFLs.srassfvNGQVLMVDggit
ke6_mouse  215  iplg.hmgdPEDVADVVAFLa.sedsgyiTGASVEVSgg..
dhk2_strvn 205  tplr.rtgrPEDVAEAVLGLv...ratytTGQVLLVDgg..
1dhr       194  .....wtp.LEFLVETFHDWi.tgnkrpnSGSLIQVVtt..
1fds       224  qvfreaaqnPEEVAEVFLTAl.rapkp..TLRYFTTEr...
1eny       225  apigwnmkdATPVAKTVCALl.sdwlpatTGDIIYADgg..

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

Back to Index