1ubi_ref2 - reference 2

Name                 ubiquitin	cysteine	

Number of sequences              17
Alignment Length                 112
Longest Sequence                 97
Shortest Sequence                76
Average Percent Identity         30
Maximum Percent Identity         71
Minimum Percent Identity         8

Sequence Name    SWISSPROT Accession
1awd                 P56408         
fer1_anasp           P06543         
fer1_cyaca           P15789         
fer1_equar           P00235         
fer_medsa            P00220         
fer2_equte           P00236         
ferv_anava           P46047         
fer2_synp6           P08451         
dmpp_psepu           P19734         
memc_metca           P22868         
rfbi_salty           P26395         
xylz_psepu           P23101         
ascd_yerps           P37911         
yfae_ecoli           P37910         
1guaB                P10113         
1ubi                 P33164         
1alo                 Q46509         

Family   1awd fer1_anasp fer1_cyaca fer1_equar fer_medsa fer2_equte ferv_anava fer2_synp6 dmpp_psepu memc_metca rfbi_salty xylz_psepu ascd_yerps yfae_ecoli
Family   1guaB
Family   1ubi
Family   1alo


1awd         1  ..YKVTLkt.psg.eeTIECPEDTYILDAAEEA.gld.lpyscragacss
fer1_anasp   1  ..FKVTLineaegtkhEIEVPDDEYILDAAEEQ.gyd.lpfscragacst
fer1_cyaca   1  ..YKIQLvnqkegvdvTINCPGDQYILDAAEEQ.gvd.lpyscragacst
fer1_equar   1  ..YKTVLkt.psg.efTLDVPEGTTILDAAEEA.gyd.lpfscragacss
fer_medsa    1  ..YKVKLvt.peg.tqEFECPDDVYILDHAEEE.giv.lpyscragscss
fer2_equte   1  ..YKVTLkt.pdg.diTFDVEPGERLIDIASEK..ad.lplscqagacst
ferv_anava   1  ..YQVRLinkkraidiTIPVDENTTILDAAEQQ.die.lpfscqsgscss
fer2_synp6   1  ..YQVEViy..qgqsqTFTADSDQSVLDSAQAA.gvd.lpascltgvctt
dmpp_psepu   1  ..YNVTIe..ptg..eVIEVEDGQTILQAALRQ.gvw.lpfacghgtcat
memc_metca   1  ..HTITAvt.edgeslRFECRSDEDVITAALRQ.nif.lmsscreggcat
rfbi_salty   1  msHIIKIf..psn..iEFSGREDESILDAALSA.gih.lehsckagdcgi
xylz_psepu   1  ..HKVATdf.edgvtrFIDANTGETVADAAYRQ.gin.lpldcrdgacga
ascd_yerps   1  .sLNVKLh..psg..iIFTSDGTSTILDAALDS.nih.ieysckdgtcgs
yfae_ecoli   1  .mARVTLri..tg.tqLLCQDEHPSLLAALESH.nva.veyqcregycgs
1guaB        1  ..NTIRVfl.pnkqrtVVNVRNGMSLHDCLMKAlkvrglqpe.......c
1ubi         1  ..MQIFVkt.ltgktiTLEVEPSDTIENVKAKIqdkegippd.......q
1alo         1  ..MIQKVit.vngieqNLFVDAEALLSDVLRQQlgltgvkvgceqgqcga

1awd        45  CAGKVEsgevdqsdqs.flddaqmg....kgfvl.TCVAYPTS......D
fer1_anasp  47  CAGKLVsgtvdqsdqs.fldddqie....agyvl.TCVAYPTS......D
fer1_cyaca  47  CAGKLVkgsvdqsdqs.fldeeqin....ngfil.TCVAYPTS......D
fer1_equar  45  CLGKVVsgsvdesegs.flddgqme....egfvl.TCIAIPES......D
fer_medsa   45  CAGKVAagevnqsdgs.fldddqie....egwvl.TCVAYAKS......D
fer2_equte  44  CLGKIVsgtvdqsegs.flddeqie....qgyvl.TCIAIPES......D
ferv_anava  47  CVAKVVegevdqseqv.fldeeqma....kgfiv.LCVSYPRS......D
fer2_synp6  45  CAARILsgevdqpdam.gvgpepak....qgytl.LCVAYPRS......D
dmpp_psepu  43  CKVQVVegevdigeaspfalmdierd...erkvl.ACCAIPLS......D
memc_metca  46  CKALCSegdydlkgcsvqalppeeee...eglvl.LCRTYPKT......D
rfbi_salty  45  CESDLLagevvdskgnifg..........qgdkilTCCCKPKT......A
xylz_psepu  46  CKCFAEsgryslgee..yiedalseaeaeqgyvl.TCQMRAES......D
ascd_yerps  44  CKAILIsgevdsaent.flteedva....kgail.TCCSKAKS......D
yfae_ecoli  45  CRTRLVagqvd......wiaeplafiq..pgeil.PCCCRAKG......D
1guaB       41  CAVFRLlheh.................kgkkarldwntdaaslig...eE
1ubi        41  QRLIFA........................gkqledgrtlsdyniqkesT
1alo        48  CSVILD........................gkvvracvtkmkrva...dG

1awd        83  VTILThqeaaly
fer1_anasp  85  VVIQThkeedl.
fer1_cyaca  85  CVIQThqeeal.
fer1_equar  83  LVIEThkeeel.
fer_medsa   83  VTIEThkeeel.
fer2_equte  82  VVIEThkedel.
ferv_anava  85  CTIRThqepyl.
fer2_synp6  83  LKIEThkedel.
dmpp_psepu  83  LVIEAdvda...
memc_metca  86  LEIELpythcr.
rfbi_salty  79  LELNAhffpel.
xylz_psepu  87  CVIRVpaasdv.
ascd_yerps  82  IELDVnyypel.
yfae_ecoli  80  IEIEM.......
1guaB       71  LQVDFl......
1ubi        67  LHLVLrlrgg..
1alo        71  AQITTiegvgq.

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE