1tvxA_ref2 - reference 2
Name toxin
Number of sequences 17
Alignment Length 73
Longest Sequence 63
Shortest Sequence 53
Average Percent Identity 37
Maximum Percent Identity 72
Minimum Percent Identity 4
Sequence Name SWISSPROT Accession
1tvxA P02775
1plfA P02777
1mgsA P09341
GRO_RAT P14095
AMC2_PIG P22952
GRO2_RABIT P47854
PF4L_PIG P43030
mi2b_rat Q10747
lix_mouse P50228
emfi_chick P08317
gro1_rabit P30782
gcp2_human P80162
il8_pig P26894
mig_mouse P18340
inig_rat P48973
1prtF P04981
1sap P13123
Family 1tvxA 1plfA 1mgsA GRO_RAT AMC2_PIG GRO2_RABIT PF4L_PIG mi2b_rat lix_mouse emfi_chick gro1_rabit gcp2_human il8_pig mig_mouse inig_rat
Family 1prtF
Family 1sap
1tvxA 1 ...gihpknIQSLEVIGKgthcnqvEVIATL...kDGRKICL.....dpd
1plfA 1 ...ginprhISSLEVIGAglhcpspQLIATL...kTGRKICL.....dqq
1mgsA 1 ...gihpknIQSVNVKSPgphcaqtEVIATL...kNGRKACL.....npa
GRO_RAT 1 ...gihfknIQSLKVMPPgphctqtEVIATL...kNGREACL.....dpe
AMC2_PIG 1 ...gihpkmISDLQVIPAgpqcskaEVIATL...kNGKEVCL.....dpk
GRO2_RABIT 1 ...gihlknIQSVKVTTPgphcdqtEVIASL...kTGQEVCL.....npt
PF4L_PIG 1 ...gihpsnIQSLEVIRAgahcakvEVIATL...kNDKKICL.....dpe
mi2b_rat 1 ..prvdfenIQSLTVTPPgphctqtEVIATL...kDGQEVCL.....npq
lix_mouse 1 ..pkinpklIANLEVIPAgpqcptvEVIAKL...kNQKEVCL.....dpe
emfi_chick 1 .skfihpksIQDVKLTPSgphcknvEIIATL...kDGREVCL.....dpt
gro1_rabit 1 ..qgihlknIQNLKVLSPgphcaqtEVIATL...kSGQEACR.....npa
gcp2_human 1 ..lrvnpktIGKLQVFPAgpqcskvEVVASL...kNGKQVCL.....dpe
il8_pig 1 .stpfhpkfIKELRVIESgphcensEIIVKL...vNGKEVCL.....dpk
mig_mouse 1 .rgtihyksLKDLKQFAPspncnktEIIATL...kNGDQTCL.....dpd
inig_rat 1 .eqtlrpraIGKLEIIPAslscphvEIIATM..kkNNEKRCL.....npe
1prtF 1 pthlyknftVQELALKLKgk..nqeFCLTAFmsgrSLVRACLsdaghehd
1sap 1 ..kevdtskIKKVWRVGK.......MVSFTYddngKTGRGAVs....ekd
1tvxA 40 ap.rIKKIVQKklagd.......
1plfA 40 np.lYKKIIKRllks........
1mgsA 40 sp.iVKKIIEKmlnsdksn....
GRO_RAT 40 ap.mVQKIVQKmlkgvpk.....
AMC2_PIG 40 ap.lIKKIVQKmldsgkkkn...
GRO2_RABIT 40 ap.vVKKIIDKmlnkasan....
PF4L_PIG 40 ap.rIKKIVQKimedggsaa...
mi2b_rat 41 ap.rLQKIIQKllkspsl.....
lix_mouse 41 ap.vIKKIIQKilgsd.......
emfi_chick 42 ap.wVQLIVKAlmakaqlns...
gro1_rabit 41 ap.mVKKFLQKrlsngnss....
gcp2_human 41 ap.fLKKVIQKildsgnkkn...
il8_pig 42 ek.wVQKVVQIflkrtekq....
mig_mouse 42 sa.nVKKLMKEwekinq......
inig_rat 43 se.aIKSLLKAvsqrrskr....
1prtF 49 t..wFDTMLGFaisayalksria
1sap 38 apkeLLDMLARaerekk......
Key
alpha helix RED
beta strand GREEN
core blocks UNDERSCORE
You can also look at the alignment in RSF format, or MSF format
with a Feature Table
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