1tvxA_ref2 - reference 2


Name                 toxin										

Number of sequences              17
Alignment Length                 73
Longest Sequence                 63
Shortest Sequence                53
Average Percent Identity         37
Maximum Percent Identity         72
Minimum Percent Identity         4

Sequence Name    SWISSPROT Accession
1tvxA                P02775         
1plfA                P02777         
1mgsA                P09341         
GRO_RAT              P14095         
AMC2_PIG             P22952         
GRO2_RABIT           P47854         
PF4L_PIG             P43030         
mi2b_rat             Q10747         
lix_mouse            P50228         
emfi_chick           P08317         
gro1_rabit           P30782         
gcp2_human           P80162         
il8_pig              P26894         
mig_mouse            P18340         
inig_rat             P48973         
1prtF                P04981         
1sap                 P13123         

Family   1tvxA 1plfA 1mgsA GRO_RAT AMC2_PIG GRO2_RABIT PF4L_PIG mi2b_rat lix_mouse emfi_chick gro1_rabit gcp2_human il8_pig mig_mouse inig_rat
Family   1prtF
Family   1sap


1tvxA        1  ...gihpknIQSLEVIGKgthcnqvEVIATL...kDGRKICL.....dpd
1plfA        1  ...ginprhISSLEVIGAglhcpspQLIATL...kTGRKICL.....dqq
1mgsA        1  ...gihpknIQSVNVKSPgphcaqtEVIATL...kNGRKACL.....npa
GRO_RAT      1  ...gihfknIQSLKVMPPgphctqtEVIATL...kNGREACL.....dpe
AMC2_PIG     1  ...gihpkmISDLQVIPAgpqcskaEVIATL...kNGKEVCL.....dpk
GRO2_RABIT   1  ...gihlknIQSVKVTTPgphcdqtEVIASL...kTGQEVCL.....npt
PF4L_PIG     1  ...gihpsnIQSLEVIRAgahcakvEVIATL...kNDKKICL.....dpe
mi2b_rat     1  ..prvdfenIQSLTVTPPgphctqtEVIATL...kDGQEVCL.....npq
lix_mouse    1  ..pkinpklIANLEVIPAgpqcptvEVIAKL...kNQKEVCL.....dpe
emfi_chick   1  .skfihpksIQDVKLTPSgphcknvEIIATL...kDGREVCL.....dpt
gro1_rabit   1  ..qgihlknIQNLKVLSPgphcaqtEVIATL...kSGQEACR.....npa
gcp2_human   1  ..lrvnpktIGKLQVFPAgpqcskvEVVASL...kNGKQVCL.....dpe
il8_pig      1  .stpfhpkfIKELRVIESgphcensEIIVKL...vNGKEVCL.....dpk
mig_mouse    1  .rgtihyksLKDLKQFAPspncnktEIIATL...kNGDQTCL.....dpd
inig_rat     1  .eqtlrpraIGKLEIIPAslscphvEIIATM..kkNNEKRCL.....npe
1prtF        1  pthlyknftVQELALKLKgk..nqeFCLTAFmsgrSLVRACLsdaghehd
1sap         1  ..kevdtskIKKVWRVGK.......MVSFTYddngKTGRGAVs....ekd

1tvxA       40  ap.rIKKIVQKklagd.......
1plfA       40  np.lYKKIIKRllks........
1mgsA       40  sp.iVKKIIEKmlnsdksn....
GRO_RAT     40  ap.mVQKIVQKmlkgvpk.....
AMC2_PIG    40  ap.lIKKIVQKmldsgkkkn...
GRO2_RABIT  40  ap.vVKKIIDKmlnkasan....
PF4L_PIG    40  ap.rIKKIVQKimedggsaa...
mi2b_rat    41  ap.rLQKIIQKllkspsl.....
lix_mouse   41  ap.vIKKIIQKilgsd.......
emfi_chick  42  ap.wVQLIVKAlmakaqlns...
gro1_rabit  41  ap.mVKKFLQKrlsngnss....
gcp2_human  41  ap.fLKKVIQKildsgnkkn...
il8_pig     42  ek.wVQKVVQIflkrtekq....
mig_mouse   42  sa.nVKKLMKEwekinq......
inig_rat    43  se.aIKSLLKAvsqrrskr....
1prtF       49  t..wFDTMLGFaisayalksria
1sap        38  apkeLLDMLARaerekk......

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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