1sbp_ref2 - reference 2

Name                 glutamine bind					

Number of sequences              18
Alignment Length                 326
Longest Sequence                 264
Shortest Sequence                216
Average Percent Identity         24
Maximum Percent Identity         70
Minimum Percent Identity         8

Sequence Name    SWISSPROT Accession
1gggA                P10344         
yqix_bacsu           P54535         
fliy_ecoli           P39174         
yckk_bacsu           P42199         
yxem_bacsu           P54952         
hisp_neigo           Q06758         
path_vibha           P52626         
arti_ecoli           P30859         
arti_haein           P45091         
lapt_pasha           P49618         
artj_ecoli           P30860         
1lst                 P02911         
hisj_ecoli           P39182         
occt_agrt6           P35121         
noct_agrt5           P35120         
1sbp                 P02906         
1wod                 P37329         
1mrp                 P35755         

Family   1gggA yqix_bacsu fliy_ecoli yckk_bacsu yxem_bacsu hisp_neigo path_vibha arti_ecoli arti_haein lapt_pasha artj_ecoli 1lst hisj_ecoli occt_agrt6 noct_agrt5
Family   1sbp
Family   1wod
Family   1mrp


1gggA        1  .....lvVATDTAFVPFefkq..gdlyvgfdvdLWAAIAKELKldyelkp
yqix_bacsu   1  .....liMGTSADYKPFeyke..gdnivgfdveLAKALAKKAGyeievqd
fliy_ecoli   1  .....llVGLEGTYPPFsfqg.ddgkltgfeveFAQQLAKHLGveaslkp
yckk_bacsu   1  .....ltVGTEGTYEPFtyhdkdtdkltgydveVITEVANSLGlkvdfke
yxem_bacsu   1  .....lhVGATGQSYPFayke..ngkltgfdveVMEAVAKKIDmkldwkl
hisp_neigo   1  .......VASNAEFAPFesld.skgnvegfdvdLMNAMAKAGNfkiefkh
path_vibha   1  .....vkVGMSGRYFPFtfvk..qdklqgfevdMWDEIGKRNDykieyvt
arti_ecoli   1  .....irFATEASYPPFesid.annqivgfdvdLAQALCKEIDatctfsn
arti_haein   1  .....ltFAMQPSYPPFettn.akgeiigfdvdVTNAICQEIQatckfks
lapt_pasha   1  ......iIVMEPSYPPFemte.ekgeiigfdvdIANAICKEMNanctfhs
artj_ecoli   1  .....inFGVSATYPPFesig.anneivgfdidLAKALCKQMQaectftn
1lst         1  alpqtvrIGTDTTYAPFsskd.akgefigfdidLGNEMCKRMQvkctwva
hisj_ecoli   1  aipqnirIGTDPTYAPFeskn.sqgelvgfdidLAKELCKRINtqctfve
occt_agrt6   1  aqeksitIATEGGYAPWnfsg.pggkldgfeidLANALCEKMKakcqiva
noct_agrt5   1  ...ksitIATEGSYAPYnfkd.aggkligfdidLGNDLCKRMNieckfve
1sbp         1  ...kdiqLLNV.SYDP......trelyeqynkaFSAHWKQETGdnvvidq
1wod         1  ...gkitvfaa.............asltnamqdIATQFKKEKGvdvvssf
1mrp         1  ....ditvyng..............qhkeaataVAKAFEQETGikvtlns

1gggA       44  m..dfsgiipalq....tknVDLALag..ititderkkaidf........
yqix_bacsu  44  m..dfnslitalk....skqVDLVLsg..mtptperkkqvdf........
fliy_ecoli  45  t..kwdgmlasld....skrIDVVInq..vtisderkkkydf........
yckk_bacsu  46  t..qwdsmfagln....skrFDVVAnq..vgktd.renqydf........
yxem_bacsu  44  l..efsglmgelq....tgkLDTISnq..vavtderketynf........
hisp_neigo  43  q..pwdslfpaln....ngdADIVMsg..vtitddrkqsmdf........
path_vibha  44  a..nfsglfglle....tgrIDTISnq..itmtdarkakylf........
arti_ecoli  45  q..afdslipslk....frrVEAVMgg..mditperekqvlf........
arti_haein  45  e..tfdalipnlk....akrFDAAIsa..iditdarakqvlf........
lapt_pasha  44  q..pfdsliqslk....qkqFDAAIsg..mgiteprkkqvlf........
artj_ecoli  45  h..afdslipslk....frkYDAVIsg..mditperskqvsf........
1lst        50  s..dfdalipslk....akkIDAIIss..lsitdkrqqeiaf........
hisj_ecoli  50  n..pldalipslk....akkIDAIMss..lsitekrqqeiaf........
occt_agrt6  50  q..nwdgimpslt....gkkYDAIMaa..msvtpkrqevigf........
noct_agrt5  47  q..awvgiipslt....agrYDAIMaa..mgiqparekviaf........
1sbp        41  shggsgkqatsvin...gieADTVTlalaydvnaiaergrid........
1wod        35  a..ssstlarqiea...gapADLFIsadqkwmdyavdkkaid........
1mrp        33  g..kseqlagqlkeegdktpADVFYteqtatfadlseagllapiseqtiq

1gggA       78  .............sdGYYKSGLLVMVKAnnnd..................
yqix_bacsu  78  .............sdVYYTANHMIVSKKdsg...................
fliy_ecoli  79  .............stPYTISGIQALVKKgnegt.................
yckk_bacsu  79  .............sdKYTTSRAVVVTKKdnnd..................
yxem_bacsu  78  .............tkPYAYAGTQIVVKKdntd..................
hisp_neigo  77  .............sdPYFEITQVVLVPKgkk...................
path_vibha  78  .............adPYVVDGAQITVRKgnds..................
arti_ecoli  79  .............ttPYYDNSALFVGQQgk....................
arti_haein  79  .............sdAYYDSSASYVALKgk....................
lapt_pasha  78  .............sePYFPSSAAFIAKKdt....................
artj_ecoli  79  .............ttPYYENSAVVIAKKdt....................
1lst        84  .............sdKLYAADSRLIAAKgspi..................
hisj_ecoli  84  .............tdKLYAADSRLVVAKnsdi..................
occt_agrt6  84  .............siPYAAGINGFAVMGdsklaempglgetysldsqada
noct_agrt5  81  .............srPYLLTPMTFLTTAdspllktqvaienlpldniape
1sbp        80  ...knwikrlpddsaPYTSTIVFLVRKGnpk...................
1wod        72  ...........tatrQTLLGNSLVVVAPkasv..............qkdf
1mrp        81  qtaqkgvplapkkdwIALSGRSRVVVYDhtklsekd..............

1gggA       97  .....vksvkdld...gkvv.avk......sGTGSVDYAkan........
yqix_bacsu  96  .....iqslkdlk...gktv.gvq......lGSIQEEKGkel........
fliy_ecoli  99  .....iktaddlk...gkkv.gvg......lGTNYEEWLrqn........
yckk_bacsu  98  .....ikseadvk...gkts.aqs......lTSNYNKLAtna........
yxem_bacsu  97  .....iksvddlk...gktv.aav......lGSNHAKNLesk........
hisp_neigo  95  .....vsssddlkk..mnkv.gvv......tGHTGDFSVskl........
path_vibha  97  .....iqgvedla...gktv.avn......lGSNFEQLLrdy........
arti_ecoli  96  .....ytsvdqlk...gkkvrsvq......nGTTHQKFImdk........
arti_haein  96  ......atlesa.....kni.gvq......nGTTFQQYTvae........
lapt_pasha  95  .........dfak...vkti.gvq......nGTTYQHYLake........
artj_ecoli  96  .....yktfadlk...gkci.gme......nGTTHQKYIqdq........
1lst       103  .....qptleslk...gkhv.gvl......qGSTQEAYAndn........
hisj_ecoli 103  .....qptveslk...gkrv.gvl......qGTTQETFGneh........
occt_agrt6 121  akkaiadissfln...gttv.gv.......qGSTTASTFldk........
noct_agrt5 118  qkaeldkftkife...gvkf.gvq......aGTSHEAFMkqm........
1sbp       108  ...qihdwndlik...pgvs.vit.pnpkssGGARWNYLaawgyalhhnn
1wod        97  tidsktnwtslln...ggrl.avgdpehvpaGIYAKEALqklga......
1mrp       117  ...meksvldyatpkwkgki.gyvs....tsGAFLEQVValskmk.....

1gggA      124  .............iktkdlrqf..pniDNAYMElgtnrADAVLHdtpnil
yqix_bacsu 123  .............speygfktedrnriSDLVQEiksdrFDAAIIedivae
fliy_ecoli 126  .............vqgvdvrty..dddPTKYQDlrvgrIDAILVdrlaal
yckk_bacsu 125  ...............gakvegv..egmAQALQMiqqgrVDMTYNdklavl
yxem_bacsu 124  ...........dpdkkinikty..etqEGTLKDvaygrVDAYVNsrtvli
hisp_neigo 123  ...........lgndnpkiarf..envPLIIKElenggLDSVVSdsavia
path_vibha 124  .............dkdgkinik..tydTGIEHDvalgrADAFIMdrlsal
arti_ecoli 124  .............hpeittvpy..dsyQNAKLDlengrIDGVFGdtavvh
arti_haein 120  .............tkqyspksy..aslQNAILDlksgrIDIIFGdtavla
lapt_pasha 118  .............kkeynvksy..asyQNAILDvqngrIDAIFGdvpvla
artj_ecoli 123  .............hpevktvsy..dsyQNAFIDlkngrIDGVFGdtavvn
1lst       130  ...........wrtkgvdvvay..anqDLIYSDltagrLDAALQdevaas
hisj_ecoli 130  ...........wapkgieivsy..qgqDNIYSDltagrIDAAFQdevaag
occt_agrt6 152  ...........yfkgsvdikey..ksvEEHNLDltsgrLDAVLAnatvla
noct_agrt5 150  .............mpsvqisty..dtiDNVVMDlkagrIDASLAsvsflk
1sbp       150  ndqakaedfvkalfknvevldsgargsTNTFVE..rgiGDVLIAweneal
1wod       137  ........wdtlspk.lapaed..vrgALALVE....rNEAPLGivygsd
1mrp       154  .gdkvalnwlkglkengklyak..nsvALQAVE....nGEVPAAlinnyy

1gggA      159  y.fiktagn...gqfkavg..dsleaqq.....ygiafpk...gsdeLRD
yqix_bacsu 160  g.yfksndd...lqgfvip..dakaeeag....saiafrk...ds.eLTD
fliy_ecoli 161  d.lvkktnd....tlavtg..eafsrqe.....sgvalrk...gnedLLK
yckk_bacsu 158  n.ylktsgn...knvkiaf..etgepqs.....tyftfrk...gsgeVVD
yxem_bacsu 161  a.qikktgl....plklag..dpivyeq.....vafpfak.ddahdkLRK
hisp_neigo 160  n.yvknnpa...kgmdfvtl.pdftteh.....ygiavrk...gdeaTVK
path_vibha 159  e.likktgl....plqlag..epfetiq.....nawpfvd.nekgrkLQA
arti_ecoli 159  e.wlkdnp.....klvvvg..dkvtdkdyfgtglgiavrq...gnteLQQ
arti_haein 155  d.miskep.....eiqfig..ekvtnkkyfgnglgiamhk...snkdLAA
lapt_pasha 153  e.markhe.....gldfvg..ekinnpnyfgdglgiathl...knqvLVD
artj_ecoli 158  e.wlktnp.....qlgvat..ekvtdpqyfgtglgiavrp...dnkaLLE
1lst       167  egflkqpag...keyafag..psvkdkkyfgdgtgvglrk...ddteLKA
hisj_ecoli 167  egflkqpvg...kdykfgg..psvkdeklfgvgtgmglrk...edneLRE
occt_agrt6 189  a.aiekpem...kgaklvg..plfsgge.fgv.vavglrk...edtaLKA
noct_agrt5 185  p.ltdkpdn...kdlkmfg..prmtggl.fgkgvgvgirk...edadLKA
1sbp       198  latnelgk....dkfeivt..psesil....aeptvsvvdkvvekkdTKA
1wod       172  a.vaskg.....vkvvatf..pedshkk...veypvavve.....ghNNA
1mrp       197  wynlakekgvenlksrlyfvrhqdpgal...vsysgaavl...kaskNQA

1gggA      195  KVNGALKTLrengtyneiy.kkwfgt
yqix_bacsu 196  KFNKALKEMedngeleklk.kkwftg
fliy_ecoli 196  AVNDAIAEMqkdgtlqals.ekwfga
yckk_bacsu 194  QVNKALKEMkedgtlskis.kkwfge
yxem_bacsu 198  KVNKALDELrkdgtlkkls.ekyfne
hisp_neigo 197  MLNDALEKVresgeydkiy.akyfak
path_vibha 196  EVNKALAEMradgtvekis.vkwfga
arti_ecoli 198  KLNTALEKVkkdgtyetiy.nkwfqk
arti_haein 194  QLNKGLAAIkangeyqkiy.dkwitk
lapt_pasha 192  QFNAALKTIkengeyqkiy.dkwmgg
artj_ecoli 197  KLNNALAAIkadgtyqkis.dqwfpq
1lst       209  AFDKALTELrqdgtydkma.kkyfdf
hisj_ecoli 209  ALNKAFAEMradgtyekla.kkyfdf
occt_agrt6 228  DFDAAIKAAsedgtiktls.lkwfkv
noct_agrt5 225  LFDKAIDAAiadgtvqkls.qqwfgy
1sbp       238  VAEAYLKYLys.pegqeiaaknfyrp
1wod       206  TVKAFYDYLkg.pqaaeif.krygft
1mrp       241  EAQKFVDFLas.kkgqeal.vaarey

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE