1r69_ref2 - reference 2


Name                 repressor										

Number of sequences              22
Alignment Length                 83
Longest Sequence                 78
Shortest Sequence                56
Average Percent Identity         28
Maximum Percent Identity         68
Minimum Percent Identity         1

Sequence Name    SWISSPROT Accession
1a04A                P10957         
narp_ecoli           P31802         
narp_haein           P44845         
ygek_ecoli           Q46791         
yz18_myctu           Q10550         
moar_kleae           P54794         
yexn_aersa           P45785         
dctr_rhoca           P37740         
fixj_azoca           P26487         
gere_bacsu           P11470         
uhpa_salty           P27667         
yxjl_bacsu           P55184         
csgd_ecoli           P52106         
agmr_pseae           P29369         
nodw_braja           P15940         
rhlr_pseae           P54292         
yhjb_ecoli           P37640         
moxx_parde           P29904         
yc29_porpu           P51343         
1r69                 P16117         
1neq                 P10037         
1au7A                P06020         

Family   1a04A narp_ecoli narp_haein ygek_ecoli yz18_myctu moar_kleae yexn_aersa dctr_rhoca fixj_azoca gere_bacsu uhpa_salty yxjl_bacsu csgd_ecoli agmr_pseae nodw_braja rhlr_pseae yhjb_ecoli moxx_parde yc29_porpu
Family   1r69
Family   1neq
Family   1au7A


1a04A        1  erdvnqltprerDIlkliaq.GLPNKMIARRL......dITESTVKVHVk
narp_ecoli   1  edpfsvlterelDVlhelaq.GLSNKQIASVL......nISEQTVKVHIr
narp_haein   1  dnpldsltdremGVlrqiat.GLSNKQIAAQL......fISEETVKVHIr
ygek_ecoli   1  ....nqltnresEIlqliad.GKTNKEIANFL......qLSRKTVETHRl
yz18_myctu   1  argwgsltpterDVvrlvse.GLSNKDIAKRL......fVSPRTVQTHLt
moar_kleae   1  ......ltakerEIvgmvre.GASNKLIARQL......dISLSTVKTHLr
yexn_aersa   1  ....drltrrerQVaelllq.GLDTEAIAAAL......gIGNGTVKNHRk
dctr_rhoca   1  .....slsareaEVmalmle.GLMNKQIAERL......gIAMRTVEVHRs
fixj_azoca   1  .kriaglsqrerQVleclvn.GLANKTIAYDL......gISPRTVEVYRa
gere_bacsu   1  .....sltkrerEVfellvq.DKTTKEIASEL......fISEKTVRNHIs
uhpa_salty   1  ....dpltkrerQVaeklaq.GMAVKEIAAEL......gLSPKTVHVHRa
yxjl_bacsu   1  eelaepftkrelEVlqqmay.GLRNEDIAEKL......fVSESTVKTHVh
csgd_ecoli   1  stesallthrekEIlnklri.GASNNEIARSL......fISENTVKTHLy
agmr_pseae   1  ...lqaltrkqlLVlermtk.GESNKQIAYNL......dIAETTVKAHVs
nodw_braja   1  kslfetlspreqAVmklvat.GLMNKQVAAEL......gLAEITVKIYRg
rhlr_pseae   1  ......lshrerEIlqwtad.GKSSGEIAIIL......sISESTVNFHHk
yhjb_ecoli   1  .kdlkslsarqrEIltmlaa.GESNKEIGRAL......nISTGTVKAHLe
moxx_parde   1  .....rltgreeEIlgmite.GMSYRDIADRA......cISYKTVSNVSl
yc29_porpu   1  ......ltprekSIlnlvid.GLTNKEIAVIL......dTSIRNVEKYVs
1r69         1  ........sissRVkskriqlGLNQAELAQKV......gTTQQSIEQLEn
1neq         1  csnekardwhraDViaglkkrKLSLSALSRQF......gYAPTTLANALe
1au7A        1  ..gmraleqfanEFkvrriklGYTQTNVGEALaavhgseFSQTTICRFEn

1a04A       44  hmlkkmklksrveaavwvhqerif.........
narp_ecoli  44  nllrklnvrsrvaatilflqqr...........
narp_haein  44  nllrklnvhsrvaatvlffeq............
ygek_ecoli  40  nimkkldvhsgieliktalrmgvcti.......
yz18_myctu  44  hvyaklglasrvqlvdeaarrgsps........
moar_kleae  38  nifaktevvnrtelvsrtwmpaaqrtlhl....
yexn_aersa  40  hlygklrlgsraelfnlflnhli..........
dctr_rhoca  39  rvlakmgarniadlarmt...............
fixj_azoca  43  nvmtkmkaaslpelvrmallagvapaddatpt.
gere_bacsu  39  namqklgvkgrsqavvellrmgelel.......
uhpa_salty  40  nlleklgvsndvelahrmfdgw...........
yxjl_bacsu  44  rilqkcnaqdrtqavvfairngi..........
csgd_ecoli  44  nlfkkiavknrtqavswandn............
agmr_pseae  41  ailrklkvhnrvqailsagdidfaaylrr....
nodw_braja  44  hvmkkmrarsladlirmsetlgisanhteqtqv
rhlr_pseae  38  niqkkfdapnktlaaayaaalgl..........
yhjb_ecoli  43  slyrrlevknrtqaammlniss...........
moxx_parde  39  vlkdklgaanladlvvkgiry............
yc29_porpu  38  rllqktntrnrtllvkysiknnl..........
1r69        37  gktkr..prflpelasalgvsvdwllngt....
1neq        45  rhw....pkgeqiianaletkpeviwpsr....
1au7A       49  lqls...fknacklkailskwleeaeqkrrtti

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE

You can also look at the alignment in RSF format, or MSF format with a Feature Table

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