1pamA_ref2 - reference 2

Name                 cyclodextrin																

Number of sequences              19
Alignment Length                 604
Longest Sequence                 511
Shortest Sequence                435
Average Percent Identity         35
Maximum Percent Identity         77
Minimum Percent Identity         16

Sequence Name    SWISSPROT Accession
1pamA                P05618         
amy_thetu            P26827         
amy_bacci            P08137         
cdgt_bacli           P14014         
cdg2_bacma           P31835         
cdg1_bacma           P04830         
cdgt_bacst           P31797         
cdgt_bacs2           P31746         
amym_bacst           P19531         
cdgt_klepn           P08704         
amyb_bacpo           P21543         
amy1_schpo           Q09840         
ydd2_schpo           Q10427         
2aaa                 P56271         
amya_aspor           P10529         
amy1_schoc           P19269         
amy1_sacfi           P21567         
1smd                 P13507         
1jdc                 P04745         

Family   1pamA amy_thetu amy_bacci cdgt_bacli cdg2_bacma cdg1_bacma cdgt_bacst cdgt_bacs2 amym_bacst cdgt_klepn amyb_bacpo
Family   amy1_schpo ydd2_schpo 2aaa amya_aspor amy1_schoc amy1_sacfi
Family   1jdc
Family   1smd


1pamA        1  .tDVIYQIFTDRfs..DGNPANnptgaa...fdgsc.tnlrlYCGGDWQG
amy_thetu    1  .tDVIYQIVTDRfv..DGNTSNnptgdl...ydpth.tslkkYFGGDWQG
amy_bacci    1  .tDVIYQIVTDRfv..DGNTANnpagsa...ydatcstnlklYCGGDWQG
cdgt_bacli   1  .tDVIYQVFTDRfl..DGNPSNnptgaa...fdgtc.snlklYCGGDWQG
cdg2_bacma   1  .tDTVYQIVTDRfv..DGNSANnptgaa...fssdh.snlklYFGGDWQG
cdg1_bacma   1  .tDVIYQIVTDRfa..DGDRTNnpagda...fsgdr.snlklYFGGDWQG
cdgt_bacst   1  .sDVVYQIVVDRfv..DGNTSNnpsgal...fssgc.tnlrkYCGGDWQG
cdgt_bacs2   1  .kDVIYQIVTDRfs..DGNPGNnpsgai...fsqnc.idlhkYCGGDWQG
amym_bacst   1  .gDVIYQIIIDRfy..DGDTTNnnpaksyglydptk.skwkmYWGGDLEG
cdgt_klepn   1  .kETIYFLFLDRfs..DGDPSNn.agfnsatydpn...nlkkYTGGDLRG
amyb_bacpo   1  .kQSIYFIMTDRfs..NGDPSNd....nyggfnsn.nsdqrkWHGGDFQG
amy1_schpo   1  .rRSIYQIITDRfsleegat...........eripcdpvrfmYCGGTWNG
ydd2_schpo   1  .kQVIYQVLTDRfaldedn............fyaka.sgn.lYLGGTWKG
2aaa         1  .tQSIYFLLTDRfgrtdns............ttatcntgneiYCGGSWQG
amya_aspor   1  .sQSIYFLLTDRfartdgs............ttatcntadqkYCGGTWQG
amy1_schoc   1  .dQSIYQIVTDRfarsdgs............ttadclvsdrkYCGGSYKG
amy1_sacfi   1  .sQSIYQIVTDRfartdgd............tsascntedrlYCGGSFQG
1smd         1  grTSIVHLFEW...................................rwvd
1jdc         1  gdEIILQGFHWNvvreapn...........................dwyn

1pamA       44  IINKIndgyLTGMGITAIWISQPVENIysvinysgv.nntAYHGYWARDF
amy_thetu   44  IINKIndgyLTGMGVTAIWISQPVENIyavlpdstfggstSYHGYWARDF
amy_bacci   45  IMNKIndgyFTGMGITALWISQPVENIysvinysgv.nntAYHGYWARDF
cdgt_bacli  44  LVNKIndnyFSDLGVTALWISQPVENIfatinysgv.tntAYHGYWARDF
cdg2_bacma  44  ITNKIndgyLTGMGITALWISQPVENItavinysgv.nntAYHGYWPRDF
cdg1_bacma  44  IIDKIndgyLTGMGVTALWISQPVENItsvikysgv.nntSYHGYWARDF
cdgt_bacst  44  IINKIndgyLTDMGVTAIWISQPVENVfsvmndasg..saSYHGYWARDF
cdgt_bacs2  44  IIDKIndgyLTDLGITALWISQPVENVyalhpsg....ytSYHGYWARDY
amym_bacst  47  VRQKL..pyLKQLGVTTIWLSPVLNNLdtlagtd....ntGYHGYWTRDF
cdgt_klepn  44  LINKL..pyLKSLGVTSIWITPPIDNVnntdaag....ntGYHGYWGRDY
amyb_bacpo  43  IINKLd..yIKNMGFTAIWITPVTMQKse..........yAYHGYHTYDF
amy1_schpo  39  IRNHLd..yIQGMGFDAIWISPIFENVegndid.....gsSYHGYWTTNL
ydd2_schpo  36  ITRNLd..yIKSLGCTAIWISPIVKNIsettdc.....gqAYHGYWAQDM
2aaa        38  IIDHLd..yIEGMGFTAIWISPITEQLpqdtad.....geAYHGYWQQKI
amya_aspor  38  IIDKLd..yIQGMGFTAIWITPVTAQLpqttay.....gdAYHGYWQQDI
amy1_schoc  38  IIDKLd..yIQGMGFTAIWISPVVEQIpdntay.....gyAYHGYWMKNI
amy1_sacfi  38  IIKKLd..yIKDMGFTAIWISPVVENIpdntay.....gyAYHGYWMKNI
1smd        16  ialecer.yLAPKGFGGVQVSPPNENVaihnp.....frpWWERYQPVSY
1jdc        24  ilrqqaa.tIAADGFSAIWMPVPWRDFsswsdg...sksgggegyfwhdf

1pamA       93  KKTNPAYGTMQDFKNLIDTAhah..nIKVIIDFAPNHtspassddpsfae
amy_thetu   94  KRTNPYFGSFTDFQNLINTAhah..nIKVIIDFAPNHtspasetdptyae
amy_bacci   94  KKTNPAFGSMTDFANLISAAhsr..nIKVVIDFAPNHtspametnasfge
cdgt_bacli  93  KKTNPYFGTMTDFQNLVTTAhak..gIKIIIDFAPNHtspametdtsfae
cdg2_bacma  93  KKTNAAFGSFTDFSNLIAAAhsh..nIKVVMDFAPNHtnpasstdpsfae
cdg1_bacma  93  KQTNDAFGDFADFQNLIDTAhah..nIKVVIDFAPNHtspadrdnpgfae
cdgt_bacst  92  KKPNPFFGTLSDFQRLVDAAhak..gIKVIIDFAPNHtspasetnpsyme
cdgt_bacs2  90  KKTNPYYGNFDDFDRLMSTAhsn..gIKVIMDFTPNHsspaletnpnyve
amym_bacst  91  KQIEEHFGNWTTFDTLVNDAhqn..gIKVIVDFVPNHstpfkandstfae
cdgt_klepn  88  FRIDEHFGNLDDFKELTSLMhspdynMKLVLDYAPNHsnanden.....e
amyb_bacpo  81  YAVDGHLGTMDKLQELVRKAhdk..nIAVMVDVVVNHt............
amy1_schpo  82  YELNHHFGTKEEFMELIQELhkr..dIWILLDVAINSm............
ydd2_schpo  79  TQLNENFGTEEDLKELVNAIhek..nMLCMVDIVVNHm............
2aaa        81  YDVNSNFGTADNLKSLSDALhar..gMYLMVDVVPDHm............
amya_aspor  81  YSLNENYGTADDLKALSSALher..gMYLMVDVVANHm............
amy1_schoc  81  DELNTNFGTADELKQLASELhsr..sMLLMVDVVYNHy............
amy1_sacfi  81  YKINENFGTADDLKSLAQELhdr..dMLLMVDIVTNHy............
1smd        60  KL.CTRSGNEDEFRNMVTRCnnv..gVRIYVDAVINHmcgnavsagtsst
1jdc        70  nk.ngrygsdaqlrqaasalgga..gVKVLYDVVPNHmnr..........

1pamA      141  ngrlydngnllggytnd....tqNLFHHYgg......tdfst....ieng
amy_thetu  142  ngrlydngtllggytnd....tnGYFHHYgg......tdfss....yedg
amy_bacci  142  ngklydngtllggytgd....tnGYFHHNgg......tdfst....lkng
cdgt_bacli 141  ngklydngnlvggytnd....tnGYFHHNgg......sdfst....leng
cdg2_bacma 141  ngalynngtllgkysnd....taGLFHHNgg......tdfst....tesg
cdg1_bacma 141  nggmydngsllgaysnd....taGLFHHNgg......tdfst....iedg
cdgt_bacst 140  ngrlydngtllggytnd....anMYFHHNgg......ttfss....ledg
cdgt_bacs2 138  ngaiydngallgnysnd....qqNLFHHNgg......tdfss....yeds
amym_bacst 139  ggalynngtymgnyfdd...atkGYFHHNgdi.....snwdd....ryea
cdgt_klepn 133  fgalyrdgvfitdyptn.vaantGWYHHNggv.....tnwnd....ffqv
amyb_bacpo 117  .gdf.qpgn...gfaka.pfdkaDWYHHNgditd...gdyns....nnqw
amy1_schpo 118  .ain.gpleqm.sfekvipfndaSFFHPHcwv......dyesndiesvqn
ydd2_schpo 115  .gha.gskp.v.nfllyqpfnsgKYYHNWqfv.....qnydd..phetit
2aaa       117  .gya.gngndv.dysvfdpfdssSYFHPYcli.....tdwdn..ltmved
amya_aspor 117  .gyd.gagssv.dysvfkpfssqDYFHPFcfi.....qnyed..qtqved
amy1_schoc 117  .awn.gdgssv.dyssftpfnqqSYFHDYcli.....tnynd..qtnved
amy1_sacfi 117  .gsd.gsgdsi.dyseytpfndqKYFHNYcli.....snydd..qaqvqs
1smd       107  cgsyfnpgsr..dfpav.pysgwDFNDGKcktgsgdienynd..atqvrd
1jdc       107  .gypdkeinlp.........agqGFWRNDcadp....gnypn.......d

1pamA      177  iykn.....lYDLADLNHNNSSVDVYLKDaikmwl.dlGVDGIRVDAVKH
amy_thetu  178  iyrn.....lFDLADLNQQNSTIDSYLKSaikvwl.dmGIDGIRLDAVKH
amy_bacci  178  iykn.....lYDLADLNHNNSTIDTYFKNairlwl.dmGIDGIRVDAVKH
cdgt_bacli 177  iykn.....lYDLADLNHNNSTIDTYFKDaiklwl.dmGVDGIRVDAVKH
cdg2_bacma 177  iykn.....lYDLADINQNNNTIDSYLKEsiqlwl.nlGVDGIRFDAVKH
cdg1_bacma 177  iykn.....lYDLADINHNNNAMDAYFKSaidlwl.gmGVDGIRFDAVKH
cdgt_bacst 176  iyrn.....lFDLADLNHQNPVIDRYLKDavkmwi.dmGIDGIRMDAVKH
cdgt_bacs2 174  iyrn.....lYDLADYDLNNTVMDQYLKEsikfwl.dkGIDGIRVDAVKH
amym_bacst 177  qwknftdpagFSLADLSQENGTIAQYLTDaav....qlVAHGLRIDAVKH
cdgt_klepn 173  knhn.....lFNLSDLNQSNTDVYQYLLDgskfwi.daGVDAIRIDAIKH
amyb_bacpo 154  kiengd...vAGLDDLNHENPATANELKNwikwllnetGIDGLRLDTVKH
amy1_schpo 159  cwlgde...nLLLADVDTENEVVLSVLEKwiknvvqeyDIDGIRFDAIKH
ydd2_schpo 154  gwlgds...hVNLPDIRTEKNEVRKFFQNwvsdlikryQFDGIRLDTAKH
2aaa       157  cwegdt...iVSLPDLDTTETAVRTIWYDwvadlvsnySVDGLRIDSVLE
amya_aspor 157  cwlgdn...tVSLPDLDTTKDVVKNEWYDwvgslvsnySIDGLRIDTVKH
amy1_schoc 157  cwegdt...eVSLPDLSTEDNEVIGVFQTwvsdfvqnySIDGLRIDSAKH
amy1_sacfi 157  cwegds...sVALPDLRTEDSDVASVFNSwvkdfvgnySIDGLRIDSAKH
1smd       152  cr.......lSGLLDLALGKDYVRSKIAEymnhli.diGVAGFRIDASKH
1jdc       136  cddgdrf..iGGDADLNTGHPQVYGMFRDeftnlrsqyGAGGFRFDFVRG

1pamA      221  MPfgwqksfmatinnyk........pvFTFGEWFlgvnei..........
amy_thetu  222  MPfgwqknfmdsilsyr........pvFTFGEWFlgtnei..........
amy_bacci  222  MPfgwqknwmssiysyk........pvFTFGEWFlgtnet..........
cdgt_bacli 221  MPqgwqknwmssiyahk........pvFTFGEWFlgsaap..........
cdg2_bacma 221  MPqgwqksyvssiyssan.......pvFTFGEWFlgpdem..........
cdg1_bacma 221  MPfgwqksfvssiyggdh.......pvFTFGEWYlgadqt..........
cdgt_bacst 220  MPfgwqkslmdeidnyr........pvFTFGEWFlsenev..........
cdgt_bacs2 218  MSegwqtslmseiyshk........pvFTFGEWFlgsgev..........
amym_bacst 223  FNsgfsksladklyqkk........diFLVGEWYgddpgtan........
cdgt_klepn 217  MDksfiqkwtsdiydysksigre..gfFFFGEWFgasantttgv......
amyb_bacpo 201  VPkgflkdfdqaa............ntFTMGEIFhg..............
amy1_schpo 206  APiefwlrmskaa............diFTIGEYFtg..............
ydd2_schpo 201  VEksffptfieaa............nvFTTGEVFhg..............
2aaa       204  VQpdffpgynkas............gvYCVGEIDng..............
amya_aspor 204  VQkdfwpgynkaa............gvYCIGEVLdg..............
amy1_schoc 204  VDtasltkfedas............gvYNLGEVYqg..............
amy1_sacfi 204  VDqgffpdfvsas............gvYSVGEVFqg..............
1smd       194  MWpgdikaildklhnlnsnwfpegskpFIYQEVIdlgg............
1jdc       184  YApervnswmtdsad..........nsFCVGQLWkgpseypnwdwrntas

1pamA      253  speyhq.fanesgmslldfrfaqkarqvfrdnt.dnmyglka.mlegsev
amy_thetu  254  dvnnty.fanesgmslldfrfsqkvrqvfrdnt.dtmyglds.miqstas
amy_bacci  254  dannty.fanesgmslldfrfsqkvrqvfrdgs.dtmyglds.mlsstaa
cdgt_bacli 253  dadntd.fanesgmslldfrfnsavrnvfrdnt.snmyalds.mltataa
cdg2_bacma 254  tqdnin.fanqsgmhlldfafaqeirevfrdks.etmtdlns.visstgs
cdg1_bacma 254  dgdnik.fanesgmnlldfeyaqevrevfrdkt.etmkdlye.vlastes
cdgt_bacst 252  dannhy.fanesgmslldfrfgqklrqvlrnns.dnwygfnq.miqdtas
cdgt_bacs2 250  dpqnhh.fanesgmslldfqfgqtirnvlkdrt.snwydfne.mitstek
amym_bacst 257  hlekvr.yannsgvnvldfdlntvirnvfgtft.qtmydlnn.mvnqtgn
cdgt_klepn 259  dg.naidyantsgsalldfgfrdtlervlvgrsgntmktlns.ylikrqt
amyb_bacpo 225  dpayvgdytr.yldaaldfpmyytikdvfghd..qsmrkikd.rysddr.
amy1_schpo 230  spaeacdyqnsgldsflnfplywpitwafnntg.lqcealai.ainqine
ydd2_schpo 225  dpkvvgdyqk.ylpstlnfplffqlretfldpk.hsmfsfydkavldvrh
2aaa       228  npasdcpyqk.vldgvlnypiywqllyafesss.gsisnlyn.miksvas
amya_aspor 228  dpaytcpyqn.vmdgvlnypiyypllnafksts.gsmddlyn.mintvks
amy1_schoc 228  dptytcpyqn.ymkgvtnyplyypvyrffsdts.atsselts.mistlqs
amy1_sacfi 228  dpaytcpyqn.yipgvsnyplyypttrffkttd.sssseltq.missvas
1smd       232  epikssdyf..gngrvtefkygaklgtvirkwngekmsylkn.wgegwgf
1jdc       224  wqqiikdwsdrakcpvfdfalkermqn.......gsiadwkh.glngnpd

1pamA      300  dyaqvndqvTFIDNHDMERfht.....................sngdrrk
amy_thetu  301  dynfindmvTFIDNHDMDRfy......................nggstrp
amy_bacci  301  dyysvndqvTFLDNHDMDRfqv.....................sgangrk
cdgt_bacli 300  dynqvndqvTFIDNHDMDRfkt.....................savnnrr
cdg2_bacma 301  synyinnmvTFIDNHDMDRfqq.....................agastrp
cdg1_bacma 301  qydyinnmvTFIDNHDMDRfqv.....................agsgtra
cdgt_bacst 299  aydevldqvTFIDNHDMDRfmi.....................dggdprk
cdgt_bacs2 297  eynevidqvTFIDNHDMSRfsv.....................gsssnrq
amym_bacst 304  eykykenliTFIDNHDMSRfls.....................vnsknka
cdgt_klepn 307  vftsddwqvVFMDNHDMARigtalrsnattfgpgnnetggsqseafaqkr
amyb_bacpo 270  yyrdaqtngVFIDNHDVKRflndasgkpga.............nydkwpq
amy1_schpo 278  ecndinvlgTFIGNHDLPRish.....................nntdqar
ydd2_schpo 273  yfkdvtvlcNFLENHDFPRffh.....................etkdial
2aaa       275  dcsdptllgNFIENHDNPRfak.....................ytsdysq
amya_aspor 275  dcpdstllgTFVENHDNPRfas.....................ytndial
amy1_schoc 275  scsdvsllgNFIENHDQVRfps.....................vtsdtsl
amy1_sacfi 275  scsdptlltNFVENHDNERfas.....................mtsdqsl
1smd       279  m..psdralVFVDNHDNQRghgaggasil..............tfwdarl
1jdc       266  pr.wrevavTFVDNHDTGYspgqnggqhh..............walqdgl

1pamA      329  LEQALAFTLTSR.gvPAIYYgseqymsg.........gNDPDNRarl...
amy_thetu  329  VEQALAFTLTSR.gvPAIYYgteqymtg.........nGDPYNRamm...
amy_bacci  330  LEQALALTLTSR.gvPAIYYgteqymtg.........nGDPNNRakm...
cdgt_bacli 329  LEQALAFTLTSR.gvPAIYYgteqyltg.........nGDPDNRgkm...
cdg2_bacma 330  TEQALAVTLTSR.gvPAIYYgteqymtg.........nGDPNNRgmm...
cdg1_bacma 330  TEQALALTLTSR.gvPAIYYgteqymtg.........dGDPNNRamm...
cdgt_bacst 328  VDMALAVLLTSR.gvPNIYYgteqymtg.........nGDPNNRkmm...
cdgt_bacs2 326  TDMALAVLLTSR.gvPTIYYgteqyvtg.........gNDPENRkpl...
amym_bacst 333  NLHQRLLSFSLRgvrPPIYYgteqymag.........gNDPYNRgmm...
cdgt_klepn 357  IDLGLVATMTVR.giPAIYYgtehyaanftsnsfgqvgSDPYNRekm...
amyb_bacpo 307  LKAALGFTLTSR.giPIIYQgteqgysg.........gDDPANRenm...
amy1_schpo 307  IMNAITFVMMWD.giPIIYYgteqnfns.........yHDPFNReal...
ydd2_schpo 302  ALNALTALIFMD.giPIIYYgqeqmfdg.........gSDPDNRegl...
2aaa       304  AKNVLSYIFLSD.giPIVYAgeeqhyag.........gKVPYNReat...
amya_aspor 304  AKNVAAFIILND.giPIIYAgqeqhyag.........gNDPANReat...
amy1_schoc 304  IKNDMAFIILGD.giPIIYYgqeqglng.........gSDPANReal...
amy1_sacfi 304  ISNAIAFVLLGD.giPVIYYgqeqglsg.........kSDPNNReal...
1smd       313  YKMAVGFMLAHPygfTRVMSsyrwpryfengkdvndwvgppndngvtkev
1jdc       301  IRQAYAYILTSP.gtpvvywdhmydwg.......................

1pamA      366  .........psfsttttayQVIQKLAPLRKsn....paiaygstherwin
amy_thetu  366  .........tsfntsttayNVIKKLAPLRKsn....paiaygttqqrwin
amy_bacci  367  .........ssfststtayNVISKLAPLRKsn....paiaygttqqrwin
cdgt_bacli 366  .........psfsksttafNVISKLAPLRKsn....paiaygstqqrwin
cdg2_bacma 367  .........tgfdtnktayKVIKALAPLRKsn....palaygsttqrwvn
cdg1_bacma 367  .........tsfntgttayKVIQALAPLRKsn....paiaygttterwvn
cdgt_bacst 365  .........ssfnkntrayQVIQKLSSLRRnn....palaygdteqrwin
cdgt_bacs2 363  .........ktfdrstnsyQIISKLASLRQtn....salgygttterwln
amym_bacst 371  .........pafdttttafKEVSTLAGLRRnn....aaiqygtttqrwin
cdgt_klepn 403  .........pgfdteseafSIIKTLGDLRKss....paiqngtytelwvn
amyb_bacpo 344  ..........nfnanhdlyQYIAKLNYVRNnh....palqngsqrekwvd
amy1_schpo 344  .......wlsnfdmenvyyKLIGILNRFRKsvqrqeenyvntrstilsvk
ydd2_schpo 339  .......wkskyntsnpmfRHLSSMIRTRQnlvetypeftyvlsfqlyid
2aaa       341  .......wlsgydtsaelyTWIATTNAIRKlaiaadsayityandafytd
amya_aspor 341  .......wlsgyptdselyKLIASANAIRNyaiskdtgfvtyknwpiykd
amy1_schoc 341  .......wlsgyntdseyyELISKLNQIRNqaikkdsaystykssvvsss
amy1_sacfi 341  .......wlsgynkesdyyKLIAKANAARNaavyqdssyatsqlsvifsn
1smd       363  tinpdttcgndwvceh.rwRQIRNMVNFRNvv........dgqpftnwyd
1jdc       327  .................ygDFIRQLIQVRRaa.....gvradsaisfhsg

1pamA      403  ..ndVIIYERkf.gnnVAVVAINrnm.ntpasitglvts..lprgs.ynd
amy_thetu  403  ..ndVYIYERkf.gnnVALVAINrnl.stsynitglyta..lpagt.ytd
amy_bacci  404  ..ndVYIYERkf.gnnVAVVAINknl.tssysiaglnts..lpsgt.ytd
cdgt_bacli 403  ..ndVYIYERkf.gksVAVVAVNrnl.ttptsitnlnts..lpsgt.ytd
cdg2_bacma 404  ..sdVYVYERkf.gsnVALVAVNrss.ttaypisgalta..lpngt.ytd
cdg1_bacma 404  ..ndVLIIERkf.gssAALVAINrns.saaypisgllss..lpagt.ysd
cdgt_bacst 402  ..gdVYVYERqf.gkdVVLVAVNrss.ssnysitglfta..lpagt.ytd
cdgt_bacs2 400  ..edIYIYERtf.gnsIVLTAVNss..nsnqtitnlnts..lpqgn.ytd
amym_bacst 408  ..ndVYIYERkf.fndVVLVAINrnt.qssysisglqta..lpngs.yad
cdgt_klepn 440  ..ddILVFERrs.gndIVIVALNrg...eantinvknia..vpngv.yps
amyb_bacpo 380  ..dsFYSFQRsk.ngdEAIVFINnswnsqtrti.gnfdn..lsngtrltn
amy1_schpo 387  ..ihHIVVQKl....nVITVLNNyg.ihneerlsivf....kplgaspkd
ydd2_schpo 382  ..dsVYVFTRp....gVIIAISNegs.tssfkveidlkehwkevpssftd
2aaa       384  ..snTIAMAKgtsgsqVITVLSNkgssgssytltlsgsg..ytsgtklie
amya_aspor 384  ..dtTIAMRKgtdgsqIVTILSNkgasgdsytlslsgag..ytagqqlte
amy1_schoc 384  ..dhYIATRKgsdanqLISIFNNlgsngsq.ditvsntg..yssgdkvid
amy1_sacfi 384  ..dhVIATKRgs....VVSVFNNlgssgss.dvtisntg..yssgedlve
1smd       404  ngsnQVAFGRg...nrGFIVFNNd...dwtfslt.lqtg..lpagt.ycd
1jdc       355  y.sgLVATVSg..sqqTLVVALN.......sdlg.npgq..vasgs.fse

1pamA      446  vlggil.ngn....tltvgaggaasnftlap.ggtavwqyttdattpiig
amy_thetu  446  vlggll.ngn....sisvasdgsvtpftlsa.gevavwqyvsssnsplig
amy_bacci  447  vlansl.sgn....sitvgssgavntftlqa.ggeavwsytkaatapvig
cdgt_bacli 446  vlggvl.ngn....nits.sggnissftlaa.gatavwqytasettptig
cdg2_bacma 447  vlggll.ngn....sitv.nggtvsnftlaa.ggtavwqytttesspiig
cdg1_bacma 447  vlngll.ngn....sitvgsggavtnftlaa.ggtavwqytapetspaig
cdgt_bacst 445  qlggll.dgn....tiqvgsngsvnafdlgp.gevgvwaysatestpiig
cdgt_bacs2 442  elqqrl.dgn....titvnangavnsfqlra.nsvavwqvsnpstsplig
amym_bacst 451  ylsgll.ggn....gisv.sngsvasftlap.gavsvwqystsasapqig
cdgt_klepn 481  li.....gnn....svsv.ankrt.tltlmq.neavvirsqsd.......
amyb_bacpo 424  ql.....snd....svqi.nngsi.tvtlap.kevkvf............
amy1_schpo 426  tffdii.nnq....kyvvntdg...tlkvvitngfpivlyptskiets..
ydd2_schpo 425  il.....tqk....tipc.kdhk...lkiksksglpkiliss...dpsfl
2aaa       430  ay.....tct....svtvdssgd...ipvpmasglprvllpasvvdsssl
amya_aspor 430  vi.....gct....tvtvgsdgn...vpvpmagglprvlypteklagski
amy1_schoc 429  ii.....scn....svlagdsgs...lsvsisggmpqvyapssvlsgsgi
amy1_sacfi 425  vl.....tcs....tvs..gssd...lqvsiqggqpqifvpaky..asdi
1smd       444  visgdkingnctgikiyvsddgka.hfsisnsaedpfiaihaeskl....
1jdc       391  avnas..ngq...vrvwrsgtgsg...ggep.galvsvsfrcdngatqmg

1pamA      490  n...
amy_thetu  490  h...
amy_bacci  491  h...
cdgt_bacli 489  h...
cdg2_bacma 490  n...
cdg1_bacma 491  n...
cdgt_bacst 489  h...
cdgt_bacs2 486  q...
amym_bacst 494  s...
cdgt_klepn 512  ....
amyb_bacpo 450  ....
amy1_schpo 466  ....
ydd2_schpo 459  ....
2aaa       468  cg..
amya_aspor 468  c...
amy1_schoc 467  c...
amy1_sacfi 459  c...
1smd       489  ....
1jdc       432  dsvy

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE