1idy - reference 2

Name                 dna binding										

Number of sequences              21
Alignment Length                 63
Longest Sequence                 60
Shortest Sequence                49
Average Percent Identity         30
Maximum Percent Identity         60
Minimum Percent Identity         6

Sequence Name    SWISSPROT Accession
1hstA                               
h1d_strpu                           
h1b_strpu                           
h1_tigca                            
h1l_myttr                           
h1_echcr                            
h11_caeel                           
h1a_pladu                           
h1_dicdi                            
h1_wheat                            
h12_caeel                           
h1l_yeast                           
h1_pea                              
h11_glysa                           
h1b_xenla                           
b4_xenla                            
h11_volca                           
h1_lycpn                            
1tc3C                               
1aoy                                
1idy                                

Family   1hstA h1d_strpu h1b_strpu h1_tigca h1l_myttr h1_echcr h11_caeel h1a_pladu h1_dicdi h1_wheat h12_caeel h1l_yeast h1_pea h11_glysa h1b_xenla b4_xenla h11_volca h1_lycpn
Family   1tc3C
Family   1aoy
Family   1idy


1hstA        1  ...shptysEMIAAAIRAEKsrggssrqsIQKYIksh.ykvg...hnadl
h1d_strpu    1  ...shpkysDMIASALESLKekkgssrqaILKYVkan.ftvg...dnanv
h1b_strpu    1  ...ahpsssEMVLAAITALKerggssaqaIRKYIekn.ytvd..ikkqai
h1_tigca     1  ...thpptsVMVMAAIKALKerngsslpaIKKYIaan.ykvd..vvknah
h1l_myttr    1  ....kpstlSMIVAAITAMKnrkgssvqaIRKYIlan.nkgin.tshlgs
h1_echcr     1  ...ahppviDMITAAIAAQKerrgssvakIQSYIaak.yrcd..inalnp
h11_caeel    1  ...ahppyiNTIKEAIKQLKdrkgaskqaILKFIsqn.yklg....dnvi
h1a_pladu    1  ...ahppvaTMVVTAILGLKerkgssmvaIKKYIaan.yrvd..varlap
h1_dicdi     1  ...nhptyqVMISTAIAHYKdrtgssqpaIIKYIean.ynva..pdtfkt
h1_wheat     1  ...ahpsyaEMVSEAIAALKersgsstiaIGKFIedk.heah.lpanfrk
h12_caeel    1  ...ahppfiNMIKEAIKQLKerkgsskiaILKYItan.ykvgdqltrins
h1l_yeast    1  ...ssksyrELIIEGLTALKerkgssrpaLKKFIken.ypivgsasnfdl
h1_pea       1  ...shptyeEMIKDAIVSLKekngssqyaIAKFIeek.qkql..panfkk
h11_glysa    1  ...thppvsEMVVNALKTLNekggssviaIKKFLvat.ykve..iekllp
h1b_xenla    1  ...sgpsasELIVKAVSSSKersgvslaaLKKALaaggydvd....knns
b4_xenla     1  ...shpptlSMVVEVLKKNTerkgtsvqaIRTRIlsahptvd......pl
h11_volca    1  ...thppyiEMVKDAITTLKerngsslpaLKKFIenk.ygkd....ihdk
h1_lycpn     1  ...thppyfQMIKEALLALNekggsspyaVAKYMedk.hkde.lpanfrk
1tc3C        1  ...rgsalsDTERAQLDVMKlln.vslheMSRKIs...........rsrh
1aoy         1  .mrssakqeELVKAFKALLKeekfssqgeIVAALqeqgfd.....ninqs
1idy         1  mevkktswtEEEDRILYQAHkrlgnrwaeIAKLLp..........grtdn

1hstA       44  qIKLSIRRLLaagv
h1d_strpu   44  hIKQALKRGVtsgq
h1b_strpu   45  fIKRALITGVekgt
h1_tigca    45  fIKKALKSLVekkk
h1l_myttr   45  aMKLAFAKGLksgv
h1_echcr    45  hIRRALKNQVksga
h11_caeel   43  qINAHHRQALkrgv
h1a_pladu   45  fIRKFIRKAVkqtk
h1_dicdi    45  qLKLALKRLVakgt
h1_wheat    46  iLLTQIKKLVaagk
h12_caeel   47  rLRAALNKGVaska
h1l_yeast   47  yFNNAIKKGVeagd
h1_pea      45  lLLQNLKKNVasgk
h11_glysa   45  fIKKFLKGAVlkge
h1b_xenla   44  rLKLALKALVtkgt
b4_xenla    42  rLKFLLRTALnkgl
h11_volca   43  nFAKTLSQVVktf.
h1_lycpn    46  iLGLQLKNSAakgk
1tc3C       36  cIRVYLKDPVsygt
1aoy        45  kVSRMLTKFGavrt
1idy        41  aIKNHWNSTMrrkv

Key

alpha helix         RED
beta strand         GREEN
core blocks         UNDERSCORE