Filename: ref2/test/1aboA_ref2.msf
Score details:
Alignment: ref2/test/1aboA_ref2.msf Score (DiffScore)= 1163
   0 sc=       0   -   .........R.....
   1 sc=       1   -   .........R.....
   2 sc=       0   -   .........S.....
   3 sc=       1   -   .........F.....
   4 sc=       1   -   .........Q.....
   5 sc=       1   -   .........E.....
   6 sc=       2   -   .T...G...P.....
   7 sc=      30   -   .A.AGSGGEE.E.G.
   8 sc=      47   -   .GMESPKTDE.TKY.
   9 sc=      63   -   NKEYTTEEITAKGQN
  10 sc=      54   -   LIAVYFLCILLFVYF
  11 sc=      10   -   .....K.........
  12 sc=      13   -   .....C.........
  13 sc=      14   -   .....A.........
  14 sc=      50   -   FF..VVV.VVFVI..
  15 sc=      14   -   VRIRQKLIVIVQYR.
  16 sc=      14   -   AAAAAAAAAAAAAAR
  17 sc=      14   -   LMKLLLLKLLLLLLV
  18 sc=      14   -   YYYFFFYYYYYFWYY
  19 sc=      14   -   DDDDDDDNDDDDDD.
  20 sc=      14   -   FYFFFYYFYYYFYYY
  21 sc=      14   -   VMKNDKQHEQENEKR
  22 sc=      14   -   AAAGPAEGATAPPKD
  23 sc=      14   -   SATNQQKTINIQQES
  24 sc=      14   -   GDADERSAHDTENRR
  25 sc=      14   -   DADEDEPEHPESDED
  26 sc=       0   -   NDDEGDRQEQDGDE.
  27 sc=       0   -   TEEDEEEDDEDEED.
  28 sc=       0   -   LVLLLLVLLLLLLI.
  29 sc=       0   -   SSSPGTTPSASAPDP
  30 sc=       0   -   IFFFFFMFFLFFMLV
  31 sc=       0   -   TKKKRIKCQRHKKHW
  32 sc=       0   -   KDRKRKKKKCKRELK
  33 sc=       0   -   GGGGGSGGGDGGGGG
  34 sc=       0   -   EDDDDADDDEEDDDP
  35 sc=       0   -   KAIIFIIVQEKVCIA
  36 sc=       0   -   LILLIILLMYFIMLK
  37 sc=       0   -   RIKRHQTTVYQTTTL
  38 sc=       0   -   VNVIVNLIVLILIVL
  39 sc=       0   -   LVLRMVLVLLLIINW
  40 sc=       0   -   GQNDDENAEDNNHKK
  41 sc=      26   -   ............RG.
  42 sc=      24   -   ............ES.
  43 sc=       3   -   .............L.
  44 sc=       0   -   .............V.
  45 sc=       0   -   .............A.
  46 sc=       0   -   .............L.
  47 sc=       0   -   .............G.
  48 sc=       0   -   .............F.
  49 sc=       0   -   .............S.
  50 sc=       0   -   .............D.
  51 sc=       0   -   .............G.
  52 sc=       0   -   .............Q.
  53 sc=       0   -   .............E.
  54 sc=       0   -   .............A.
  55 sc=      54   -   Y.EK...VE.S.DR.
  56 sc=      68   -   NAEPNKSTSSSKEPG
  57 sc=      78   -   HICESQTK.SEDDEE
  58 sc=      38   -   NDDEDEND.E.DEEG
  59 sc=      27   -   GEQQPGKPGIGPIIA
  60 sc=      27   -   EGN.NGDNEHDNEGV
  61 sc=      14   -   WWWWWWWWWWWWWWV
  62 sc=      14   -   CMYWWWWYWWWWWLI
  63 sc=      14   -   EYKNKRKKKREEWNQ
  64 sc=      27   -   AGA.GGVAAVAGAGD
  65 sc=      62   -   QT.A....RQR..Y.
  66 sc=      68   -   .VEE...KS.S..N.
  67 sc=      74   -   .QLDADENLDLQRE.
  68 sc=      62   -   TRNSCYVKAKTLLT.
  69 sc=      14   -   KT.EHGNVTNTNNTN
  70 sc=       0   -   NGGGGGDGRGGNDGS
  71 sc=       0   -   GRKKQKRRKHERKED
  72 sc=       0   -   QTDRTKQEEETRERI
  73 sc=       0   -   GGGGGQGGGGGGGGK
  74 sc=      14   -   WMFMMLFIYYYIYDV
  75 sc=      14   -   .....W.........
  76 sc=       0   -   VLIIFFVIIAIFVFV
  77 sc=       0   -   PPPPPPPPPPPPPPP
  78 sc=       0   -   SAKVRSAASSSSRGR
  79 sc=       0   -   NNNPNNANNSNNNTR
  80 sc=       0   -   YYYYYYYYYYYYLYK
  81 sc=       0   -   IVIVVVVVVLVVLVA
  82 sc=       0   -   TEEETEKQAVACGEK
  83 sc=       0   -   PAMKPEKKREPPLYI
  84 sc=       0   -   VIKYVMLRVKVYYII
  85 sc=       0   -   N.P..V..DS..PGR
  86 sc=       0   -   .............RD
  87 sc=       0   -   .............K.
  88 sc=       0   -   .............K.
  89 sc=       0   -   .............I.
  90 sc=       0   -   .............S.
  91 sc=       0   -   .............P.

