Filename: ref1/test1/1csy_ref1.msf
Score details:
Alignment: ref1/test1/1csy_ref1.msf Score (DiffScore)= 206
   0 sc=       0   -   SE..H
   1 sc=       0   -   HM.LH
   2 sc=       0   -   EK.QD
   3 sc=       0   -   KPMDE
   4 sc=       0   -   MHRAK
   5 sc=       0   -   PPRET
   6 sc=       0   -   WWWWW
   7 sc=       0   -   FFFYN
   8 sc=       0   -   HFHWV
   9 sc=       0   -   GGPGG
  10 sc=       0   -   KKNDS
  11 sc=       0   -   IIIIS
  12 sc=       0   -   SPTSN
  13 sc=       0   -   RRGRR
  14 sc=       0   -   EAVEN
  15 sc=       0   -   EKEEK
  16 sc=       0   -   SAAVA
  17 sc=       0   -   EEENE
  18 sc=       0   -   QENEN
  19 sc=       4   -   I....
  20 sc=       4   -   VMLKL
  21 sc=       4   -   LLLLL
  22 sc=       6   -   ISLRR
  23 sc=       6   -   GKTDG
  24 sc=       6   -   SQRTK
  25 sc=       2   -   KRG..
  26 sc=       0   -   THVAR
  27 sc=       0   -   NDDDD
  28 sc=       0   -   GGGGG
  29 sc=       0   -   KASTT
  30 sc=       0   -   FFFFF
  31 sc=       0   -   LLLLL
  32 sc=       0   -   IIAVV
  33 sc=       0   -   RRRRR
  34 sc=       0   -   AEPDE
  35 sc=       0   -   RSSAS
  36 sc=       6   -   .EK..
  37 sc=       6   -   DSSSS
  38 sc=       4   -   NANTK
  39 sc=       0   -   ...K.
  40 sc=       4   -   ...M.
  41 sc=       0   -   NPPHQ
  42 sc=       0   -   GGGGG
  43 sc=       0   -   SDDDC
  44 sc=       0   -   YFFYY
  45 sc=       0   -   ASTTA
  46 sc=       0   -   LLLLC
  47 sc=       0   -   CSSTS
  48 sc=       0   -   LVVLV
  49 sc=       0   -   LKRRV
  50 sc=       0   -   HFRKV
  51 sc=       0   -   EGNGD
  52 sc=       0   -   GNGGG
  53 sc=       0   -   KDANE
  54 sc=       0   -   VVVNV
  55 sc=       0   -   LQTKK
  56 sc=       0   -   HHHLH
  57 sc=       0   -   YFIIC
  58 sc=       0   -   RKKKV
  59 sc=       0   -   IVIII
  60 sc=       0   -   DLQFN
  61 sc=       0   -   KRNHK
  62 sc=       7   -   DDTRT
  63 sc=       7   -   KGGDA
  64 sc=       7   -   TADGT
  65 sc=       7   -   GGYKG
  66 sc=       8   -   KKYYY
  67 sc=       8   -   LYDGG
  68 sc=       8   -   SFLFF
  69 sc=       8   -   ILYSA
  70 sc=       3   -   P....
  71 sc=       4   -   EWGDE
  72 sc=       4   -   GVGPP
  73 sc=       4   -   KVELY
  74 sc=       4   -   KKKTN
  75 sc=       4   -   ....L
  76 sc=       0   -   FFFFY
  77 sc=       0   -   DNANS
  78 sc=       0   -   TSTSS
  79 sc=       0   -   LLLVL
  80 sc=       0   -   WNAVK
  81 sc=       0   -   QEEEE
  82 sc=       0   -   LLLLL
  83 sc=       0   -   VVVIV
  84 sc=       0   -   EDQNL
  85 sc=       0   -   HYYHH
  86 sc=       0   -   YHYYY
  87 sc=       0   -   SRMRQ
  88 sc=       0   -   YSENH
  89 sc=       0   -   KTHET
  90 sc=       0   -   ASHSS
  91 sc=       3   -   .VGLL
  92 sc=       3   -   .SQAV
  93 sc=       3   -   .RLQQ
  94 sc=       5   -   .NKY.
  95 sc=       4   -   .QENH
  96 sc=       6   -   .QKPN
  97 sc=       7   -   D.NKD
  98 sc=       4   -   GIGLS
  99 sc=       4   -   LFDDL
 100 sc=       4   -   LLVVN
 101 sc=       4   -   RRI.V
 102 sc=       0   -   VDEKT
 103 sc=       0   -   LILLL
 104 sc=       4   -   TEKLA
 105 sc=       4   -   VQYYY
 106 sc=       4   -   PVPPP
 107 sc=       4   -   CPLVV
 108 sc=       4   -   QQNSY
 109 sc=       4   -   KQ..A

