Filename: ref1/test1/1csy_ref1.msf
Score details:
Alignment: ref1/test1/1csy_ref1.msf Score (DiffScore)= 558
   0 sc=       7   -   SEMLH
   1 sc=       4   -   ..R..
   2 sc=       7   -   HMRQH
   3 sc=       7   -   EKWDD
   4 sc=       7   -   KPFAE
   5 sc=       7   -   MHH.K
   6 sc=       4   -   PPPET
   7 sc=       4   -   WWNWW
   8 sc=       4   -   FFIYN
   9 sc=       4   -   HFTWV
  10 sc=       4   -   GGGGG
  11 sc=       4   -   KKVDS
  12 sc=       4   -   II.IS
  13 sc=       4   -   SP.SN
  14 sc=       4   -   RR.RR
  15 sc=       4   -   EAEEN
  16 sc=       6   -   EK...
  17 sc=       6   -   SAAEK
  18 sc=       6   -   EEEVA
  19 sc=       4   -   .E...
  20 sc=       8   -   QMNNE
  21 sc=       8   -   ILLEN
  22 sc=       8   -   VSLKL
  23 sc=       8   -   LKLLL
  24 sc=       8   -   IQTRR
  25 sc=       8   -   GRRDG
  26 sc=       8   -   SHGTK
  27 sc=       7   -   K.VAR
  28 sc=       4   -   TDDDD
  29 sc=       4   -   NGGGG
  30 sc=       4   -   GASTT
  31 sc=       4   -   KFFFF
  32 sc=       4   -   FLLLL
  33 sc=       4   -   LIAVV
  34 sc=       4   -   IRRRR
  35 sc=       4   -   REPDE
  36 sc=       4   -   ASSAS
  37 sc=       4   -   REKSS
  38 sc=       7   -   DSSTK
  39 sc=       7   -   NANKQ
  40 sc=       7   -   NPPMG
  41 sc=       7   -   GGGHC
  42 sc=       4   -   ...G.
  43 sc=       4   -   SDDDY
  44 sc=       4   -   YFFYA
  45 sc=       4   -   ASTTC
  46 sc=       4   -   LLLLS
  47 sc=       4   -   CSSTV
  48 sc=       4   -   LVVLV
  49 sc=       4   -   LKRRV
  50 sc=       4   -   HFRK.
  51 sc=       0   -   EGNGD
  52 sc=       0   -   GNGGG
  53 sc=       0   -   KDANE
  54 sc=       0   -   VVVNV
  55 sc=       0   -   LQTKK
  56 sc=       0   -   HHHLH
  57 sc=       0   -   YFIIC
  58 sc=       0   -   RKKKV
  59 sc=       0   -   IVIII
  60 sc=       0   -   DLQFN
  61 sc=       0   -   KRNHK
  62 sc=       7   -   DDTRT
  63 sc=       7   -   KGGDA
  64 sc=       7   -   TADGT
  65 sc=       7   -   GGYKG
  66 sc=       8   -   KKYYY
  67 sc=       8   -   LYDGG
  68 sc=       8   -   SFLFF
  69 sc=       8   -   ILYSA
  70 sc=       7   -   PWGDE
  71 sc=       7   -   EVGPP
  72 sc=       7   -   GVELY
  73 sc=       7   -   KKKTN
  74 sc=       7   -   .FFFL
  75 sc=       4   -   ....Y
  76 sc=       4   -   KNANS
  77 sc=       4   -   FSTSS
  78 sc=       4   -   .LLVL
  79 sc=       4   -   DNAVK
  80 sc=       4   -   TEEEE
  81 sc=       4   -   LLLLL
  82 sc=       4   -   WVVIV
  83 sc=       4   -   QDQNL
  84 sc=       4   -   LYYHH
  85 sc=       4   -   .HYYY
  86 sc=       4   -   .RMRQ
  87 sc=       7   -   VS.NH
  88 sc=       7   -   ETEET
  89 sc=       7   -   HSHSS
  90 sc=       7   -   YVHLL
  91 sc=       7   -   SSGAV
  92 sc=       3   -   .R...
  93 sc=       3   -   .N...
  94 sc=       9   -   YQQQQ
  95 sc=       9   -   KQLYH
  96 sc=       9   -   AIKNN
  97 sc=       7   -   DFEPD
  98 sc=       7   -   GLKKS
  99 sc=       7   -   LRNLL
 100 sc=       4   -   ..G..
 101 sc=       7   -   LDDDN
 102 sc=       7   -   RIVVV
 103 sc=       4   -   ..I..
 104 sc=       4   -   VEEKT
 105 sc=       4   -   LQLLL
 106 sc=       4   -   TVKLA
 107 sc=       4   -   VPYYY
 108 sc=       4   -   PQPPP
 109 sc=       4   -   C.LVV
 110 sc=       6   -   Q...Y
 111 sc=       6   -   KQNSA

