Filename: ref1/test1/1csy_ref1.msf
Score details:
Alignment: ref1/test1/1csy_ref1.msf Score (DiffScore)= 240
   0 sc=       7   -   SEMLH
   1 sc=       3   -   HM.QH
   2 sc=       4   -   EK.DD
   3 sc=       7   -   KP.AE
   4 sc=       4   -   MHREK
   5 sc=       4   -   PPR.T
   6 sc=       0   -   WWWWW
   7 sc=       0   -   FFFYN
   8 sc=       0   -   HFHWV
   9 sc=       0   -   GGPGG
  10 sc=       0   -   KKNDS
  11 sc=       0   -   IIIIS
  12 sc=       0   -   SPTSN
  13 sc=       0   -   RRGRR
  14 sc=       0   -   EAVEN
  15 sc=       0   -   EKEEK
  16 sc=       0   -   SAAVA
  17 sc=       0   -   EEENE
  18 sc=       0   -   QENEN
  19 sc=       0   -   IMLKL
  20 sc=       0   -   VLLLL
  21 sc=       4   -   L.L..
  22 sc=       6   -   I.T..
  23 sc=       8   -   GSRRR
  24 sc=       8   -   SKGDG
  25 sc=       9   -   KQVTK
  26 sc=       6   -   TR.AR
  27 sc=       4   -   .H...
  28 sc=       0   -   NDDDD
  29 sc=       0   -   GGGGG
  30 sc=       0   -   KASTT
  31 sc=       0   -   FFFFF
  32 sc=       0   -   LLLLL
  33 sc=       0   -   IIAVV
  34 sc=       0   -   RRRRR
  35 sc=       0   -   AEPDE
  36 sc=       0   -   RSSAS
  37 sc=       6   -   .EK..
  38 sc=       6   -   DSSSS
  39 sc=       4   -   NANTK
  40 sc=       0   -   ...K.
  41 sc=       4   -   ...M.
  42 sc=       0   -   NPPHQ
  43 sc=       0   -   GGGGG
  44 sc=       0   -   SDDDC
  45 sc=       0   -   YFFYY
  46 sc=       0   -   ASTTA
  47 sc=       0   -   LLLLC
  48 sc=       0   -   CSSTS
  49 sc=       0   -   LVVLV
  50 sc=       0   -   LKRRV
  51 sc=       0   -   HFRKV
  52 sc=       0   -   EGNGD
  53 sc=       0   -   GNGGG
  54 sc=       0   -   KDANE
  55 sc=       0   -   VVVNV
  56 sc=       0   -   LQTKK
  57 sc=       0   -   HHHLH
  58 sc=       0   -   YFIIC
  59 sc=       0   -   RKKKV
  60 sc=       0   -   IVIII
  61 sc=       0   -   DLQFN
  62 sc=       0   -   KRNHK
  63 sc=       7   -   DDTRT
  64 sc=       7   -   KGGDA
  65 sc=       7   -   TADGT
  66 sc=       7   -   GGYKG
  67 sc=       8   -   KKYYY
  68 sc=       8   -   LYDGG
  69 sc=       8   -   SFLFF
  70 sc=       8   -   ILYSA
  71 sc=       7   -   PWGDE
  72 sc=       7   -   EV...
  73 sc=       6   -   GVGPP
  74 sc=       6   -   K.ELY
  75 sc=       4   -   KKKTN
  76 sc=       4   -   ....L
  77 sc=       0   -   FFFFY
  78 sc=       0   -   DNANS
  79 sc=       0   -   TSTSS
  80 sc=       0   -   LLLVL
  81 sc=       0   -   WNAVK
  82 sc=       0   -   QEEEE
  83 sc=       0   -   LLLLL
  84 sc=       0   -   VVVIV
  85 sc=       0   -   EDQNL
  86 sc=       0   -   HYYHH
  87 sc=       0   -   YHYYY
  88 sc=       0   -   SRMRQ
  89 sc=       0   -   YSENH
  90 sc=       0   -   KTHET
  91 sc=       6   -   A.H..
  92 sc=       0   -   ..G..
  93 sc=       6   -   .SQSS
  94 sc=       3   -   .VLLL
  95 sc=       3   -   .SKAV
  96 sc=       3   -   .REQQ
  97 sc=       3   -   .NKYH
  98 sc=       4   -   .QNNN
  99 sc=       4   -   DQGPD
 100 sc=       4   -   GIDKS
 101 sc=       4   -   LFVLL
 102 sc=       4   -   LL.DN
 103 sc=       0   -   RRIVV
 104 sc=       0   -   VDEKT
 105 sc=       0   -   LILLL
 106 sc=       4   -   TEKLA
 107 sc=       4   -   .Q...
 108 sc=       0   -   VVYYY
 109 sc=       0   -   PPPPP
 110 sc=       0   -   CQLVV
 111 sc=       0   -   QQNSY
 112 sc=       0   -   K...A

