Filename: ref1/test1/1csy_ref1.msf
Score details:
Alignment: ref1/test1/1csy_ref1.msf Score (DiffScore)= 187
   0 sc=       0   -   SE..H
   1 sc=       0   -   HM.LH
   2 sc=       0   -   EK.QD
   3 sc=       0   -   KPMDE
   4 sc=       0   -   MHRAK
   5 sc=       0   -   PPRET
   6 sc=       0   -   WWWWW
   7 sc=       0   -   FFFYN
   8 sc=       0   -   HFHWV
   9 sc=       0   -   GGPGG
  10 sc=       0   -   KKNDS
  11 sc=       0   -   IIIIS
  12 sc=       0   -   SPTSN
  13 sc=       0   -   RRGRR
  14 sc=       0   -   EAVEN
  15 sc=       0   -   EKEEK
  16 sc=       0   -   SAAVA
  17 sc=       0   -   EEENE
  18 sc=       6   -   QEN..
  19 sc=       4   -   I....
  20 sc=       8   -   VMLEN
  21 sc=       8   -   LLLKL
  22 sc=       8   -   ISLLL
  23 sc=       8   -   GKTRR
  24 sc=       8   -   SQRDG
  25 sc=       8   -   KRGTK
  26 sc=       0   -   THVAR
  27 sc=       0   -   NDDDD
  28 sc=       0   -   GGGGG
  29 sc=       0   -   KASTT
  30 sc=       0   -   FFFFF
  31 sc=       0   -   LLLLL
  32 sc=       0   -   IIAVV
  33 sc=       0   -   RRRRR
  34 sc=       0   -   AEPDE
  35 sc=       0   -   RSSAS
  36 sc=       0   -   DEKSS
  37 sc=       6   -   NSSTK
  38 sc=       0   -   ...K.
  39 sc=       6   -   .ANM.
  40 sc=       0   -   NPPHQ
  41 sc=       0   -   GGGGG
  42 sc=       0   -   SDDDC
  43 sc=       0   -   YFFYY
  44 sc=       0   -   ASTTA
  45 sc=       0   -   LLLLC
  46 sc=       0   -   CSSTS
  47 sc=       0   -   LVVLV
  48 sc=       0   -   LKRRV
  49 sc=       0   -   HFRKV
  50 sc=       0   -   EGNGD
  51 sc=       0   -   GNGGG
  52 sc=       0   -   KDANE
  53 sc=       0   -   VVVNV
  54 sc=       0   -   LQTKK
  55 sc=       0   -   HHHLH
  56 sc=       0   -   YFIIC
  57 sc=       0   -   RKKKV
  58 sc=       0   -   IVIII
  59 sc=       0   -   DLQFN
  60 sc=       0   -   KRNHK
  61 sc=       7   -   DDTRT
  62 sc=       4   -   KG...
  63 sc=       7   -   TAGDA
  64 sc=       7   -   GGDGT
  65 sc=       7   -   KKYKG
  66 sc=       4   -   LYYYY
  67 sc=       7   -   S.DGG
  68 sc=       7   -   IFLFF
  69 sc=       7   -   PLYSA
  70 sc=       4   -   EWGDE
  71 sc=       4   -   GVGPP
  72 sc=       4   -   KVELY
  73 sc=       4   -   KKKTN
  74 sc=       4   -   FFFFL
  75 sc=       4   -   DNANY
  76 sc=       4   -   ....S
  77 sc=       0   -   TSTSS
  78 sc=       0   -   LLLVL
  79 sc=       0   -   WNAVK
  80 sc=       0   -   QEEEE
  81 sc=       0   -   LLLLL
  82 sc=       0   -   VVVIV
  83 sc=       0   -   EDQNL
  84 sc=       0   -   HYYHH
  85 sc=       0   -   YHYYY
  86 sc=       0   -   SRMRQ
  87 sc=       0   -   YSENH
  88 sc=       0   -   KTHET
  89 sc=       4   -   .SHSS
  90 sc=       0   -   ..G..
  91 sc=       0   -   .VQLL
  92 sc=       0   -   .SLAV
  93 sc=       0   -   .RKQQ
  94 sc=       0   -   .NEYH
  95 sc=       4   -   AQKNN
  96 sc=       0   -   DQNPD
  97 sc=       0   -   GIGKS
  98 sc=       0   -   LFDLL
  99 sc=       0   -   LLVDN
 100 sc=       0   -   RRIVV
 101 sc=       0   -   VDEKT
 102 sc=       0   -   LILLL
 103 sc=       4   -   TEKLA
 104 sc=       4   -   VQYYY
 105 sc=       4   -   PVPPP
 106 sc=       4   -   CPLVV
 107 sc=       4   -   QQNSY
 108 sc=       4   -   KQ..A

